HHsearch results for GI: 254780833 and protein with PDBid: 2b2x_A
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune system; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.81 E-value=6e-19 Score=131.41 Aligned_cols=181 Identities=17% Similarity=0.281 Sum_probs=136.6
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCC--CHHHHH
Q ss_conf 134674069985276311566787214898999998750023355553110479878863674178166655--878999
Q gi|254780833|r 164 KSDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAW--GVQHIQ 241 (371)
Q Consensus 164 ~~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~--~~~~~~ 241 (371)
.+..++|++|++|.|+||.. .+..++.+..+++.+... ...+|++++.|++.+....+|+. +...+.
T Consensus 18 ~c~~~~DivfvlD~S~sv~~--------~~~~k~fv~~li~~~~i~---~~~~rv~lv~fs~~~~~~~~l~~~~~~~~~~ 86 (223)
T 2b2x_A 18 ECSTQLDIVIVLDGSNSIYP--------WESVIAFLNDLLKRMDIG---PKQTQVGIVQYGENVTHEFNLNKYSSTEEVL 86 (223)
T ss_dssp ----CEEEEEEEECSTTCCC--------HHHHHHHHHHHHTTSCCS---TTSCCEEEEEESSSEEEEECTTTCCSHHHHH
T ss_pred CCCCCEEEEEEEECCCCCCC--------HHHHHHHHHHHHHHCCCC---CCCCEEEEEEEECCEEEECCCCCCCCHHHHH
T ss_conf 89986569999979887436--------999999999999971558---8860898998604267860545557689999
Q ss_pred HHHHCCCCCC--CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 9974015688--74564237889999874211012346777666169999840458888889789999999999789879
Q gi|254780833|r 242 EKINRLIFGS--TTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIV 319 (371)
Q Consensus 242 ~~i~~l~~~g--~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i 319 (371)
..++.+...+ +|++..++.++.+.+..... ...++..|++||+|||..++. .........+|+.||+|
T Consensus 87 ~~i~~i~~~~~~~t~~~~aL~~~~~~~~~~~~------g~R~~~~kvlillTDG~~~d~----~~~~~~a~~lk~~gi~v 156 (223)
T 2b2x_A 87 VAANKIVQRGGRQTMTALGIDTARKEAFTEAR------GARRGVKKVMVIVTDGESHDN----YRLKQVIQDCEDENIQR 156 (223)
T ss_dssp HHHTTCCCCCCSSCCHHHHHHHHHHTTSSGGG------TCCTTSEEEEEEEESSCCTTG----GGHHHHHHHHHTTTEEE
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC------CCCCCCCEEEEEEECCCCCCC----HHHHHHHHHHHHCCCEE
T ss_conf 99874312477332217778888887503335------888787257999826987883----12999999998759989
Q ss_pred EEEEECCCCCH---------HHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHHHHE
Q ss_conf 99994186427---------989983389---80898289899999999999964000
Q gi|254780833|r 320 YAIGVQAEAAD---------QFLKNCASP---DRFYSVQNSRKLHDAFLRIGKEMVKQ 365 (371)
Q Consensus 320 ~tIg~~~~~~~---------~~l~~cAs~---~~~y~~~~~~~L~~af~~I~~~i~~~ 365 (371)
|+||++.+.+. ..|+.+||. .|+|.+++..+|.+.+++|.++|...
T Consensus 157 ~~Igvg~~~~~~~~~~~~~~~eL~~IAs~p~~~~~f~~~d~~~L~~i~~~l~~~ic~~ 214 (223)
T 2b2x_A 157 FSIAILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALGERIFAL 214 (223)
T ss_dssp EEEEECGGGC---CCCHHHHHHHHTTSCSSGGGTEEEESSTTGGGGGHHHHHTTTC--
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 9999846666443244236999999866998551898189999999999999886431