HHsearch results for GI: 254780833 and protein with PDBid: 3eh2_A
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=94.70 E-value=0.17 Score=26.11 Aligned_cols=181 Identities=12% Similarity=0.112 Sum_probs=98.9
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCEEEEEEEEEECCCCEE---------------
Q ss_conf 467406998527631156678721489899999875002335555-3110479878863674178---------------
Q gi|254780833|r 166 DIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIP-DVNNVVRSGLVTFSSKIVQ--------------- 229 (371)
Q Consensus 166 ~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~--------------- 229 (371)
..+.-.+|++|.|...... .-+..+.+++...++...... ......++|+++|+.....
T Consensus 171 ~~pp~~vfvID~S~~a~~~-----g~~~~~~~~i~~~l~~lp~~~~~~~~~~~vglitf~~~v~~~~~~~~~~~~~~~v~ 245 (766)
T 3eh2_A 171 PSPPAFIFMIDVSYNAIRT-----GLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVV 245 (766)
T ss_dssp CCCCEEEEEEECSHHHHHT-----THHHHHHHHHHHHGGGCCCCSSCSSCCCEEEEEEESSSEEEEECCTTCSSCEEEEE
T ss_pred CCCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCCEEEEC
T ss_conf 9987899999887477665-----48999999999999846122224775248999973877998446786433347640
Q ss_pred --------------ECCCCCCHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
Q ss_conf --------------16665587899999740156------8874564237889999874211012346777666169999
Q gi|254780833|r 230 --------------TFPLAWGVQHIQEKINRLIF------GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIF 289 (371)
Q Consensus 230 --------------~~~lt~~~~~~~~~i~~l~~------~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl 289 (371)
..|+......+.+.++.+.. ...+....++..+...+... ...-|++++
T Consensus 246 ~d~~d~~~p~~~~~l~~~~e~~~~i~~lL~~l~~~~~~~~~~~~~~g~Al~~a~~~l~~~-----------~~gG~ii~f 314 (766)
T 3eh2_A 246 SDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKAA-----------ECAGKLFLF 314 (766)
T ss_dssp CCTTTCCCCCCTTSSBCTTTTHHHHHHHHHHHHHHHTTCCCCCCCSHHHHHHHHHHHHHT-----------TCCEEEEEE
T ss_pred CCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-----------CCCCCEEEE
T ss_conf 573113555665502155888999999987364334688788754799999999997055-----------779848999
Q ss_pred EECCCCCCCCCC----------------------HHHHHHHHHHHHHCCCEEEEEEECCCC-CHHHHHHHC--CCCEEEE
Q ss_conf 840458888889----------------------789999999999789879999941864-279899833--8980898
Q gi|254780833|r 290 LTDGENSSPNID----------------------NKESLFYCNEAKRRGAIVYAIGVQAEA-ADQFLKNCA--SPDRFYS 344 (371)
Q Consensus 290 ~TDG~~~~~~~~----------------------~~~~~~~c~~~k~~gi~i~tIg~~~~~-~~~~l~~cA--s~~~~y~ 344 (371)
.+.|.++.+... ..--..++..+...||.|-.+.++.+. +-..|..++ |+|+.|.
T Consensus 315 ~~s~P~t~GpG~l~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvdlf~~s~~~~dl~~l~~l~~~TGG~v~~ 394 (766)
T 3eh2_A 315 HTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYK 394 (766)
T ss_dssp ECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHHTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 51688778997420443223457620133305625899999999998695799999548765879999998744955999
Q ss_pred ECCH--H-HHHHHHHHHHHHH
Q ss_conf 2898--9-9999999999964
Q gi|254780833|r 345 VQNS--R-KLHDAFLRIGKEM 362 (371)
Q Consensus 345 ~~~~--~-~L~~af~~I~~~i 362 (371)
.++. . +..+....+.+.+
T Consensus 395 ~~~f~~~~~~~~l~~~l~~~~ 415 (766)
T 3eh2_A 395 YASFQVENDQERFLSDLRRDV 415 (766)
T ss_dssp CTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHH
T ss_conf 689764222789999999975