HHsearch results for GI: 254780833 and protein with PDBid: 3fcs_B

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, alternative splicing, cell adhesion, disease mutation, glycoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.06  E-value=1.6e-08  Score=68.49  Aligned_cols=192  Identities=16%  Similarity=0.191  Sum_probs=114.2

Q ss_pred             EEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCC----------
Q ss_conf             2210001346740699852763115667872148989999987500233555531104798788636741----------
Q gi|254780833|r  158 SVKISSKSDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKI----------  227 (371)
Q Consensus       158 ~~~~~~~~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~----------  227 (371)
                      ........+.|+|+++++|.|+||..       .++.++.....+.+.+...   ....|+|+-+|-+++          
T Consensus       101 ~~~~~~~~~~pvdly~lmD~s~sm~d-------d~~~l~~l~~~l~~~~~~~---t~~~~~gfgsfvdk~~~p~~~~~~~  170 (690)
T 3fcs_B          101 SIQVRQVEDYPVDIYYLMDLSYSMKD-------DLWSIQNLGTKLATQMRKL---TSNLRIGFGAFVDKPVSPYMYISPP  170 (690)
T ss_dssp             EEEEECCBTCCEEEEEEEECSGGGHH-------HHHHTTTTTHHHHHHHHHH---CSCEEEEEEEECCCSSTTTSCCCST
T ss_pred             EEEEECCCCCCCCEEEEEECCCCHHH-------HHHHHHHHHHHHHHHHHHH---CCCCEEEEEEECCCCCCCCCCCCCH
T ss_conf             89873378898437999836752788-------9999999999999999862---8673687777204656775667676


Q ss_pred             --------------------EEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf             --------------------781666558789999974015688745642378899998742110123467776661699
Q gi|254780833|r  228 --------------------VQTFPLAWGVQHIQEKINRLIFGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYI  287 (371)
Q Consensus       228 --------------------~~~~~lt~~~~~~~~~i~~l~~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~i  287 (371)
                                          .-..|||.+.......|+....+|+-...+|---|..+..-   =.... ..+++.+|+|
T Consensus       171 ~~~~~pc~~~~~~c~~~~~~~~~~~lt~~~~~f~~~v~~~~~s~n~d~pe~~~dal~q~~v---c~~~i-gwr~~~~~~~  246 (690)
T 3fcs_B          171 EALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATV---CDEKI-GWRNDASHLL  246 (690)
T ss_dssp             TTTTCTTSSSSSCCCCCCSEEEEEEEESCHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHH---CHHHH-TCCSSSEEEE
T ss_pred             HHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHH---CCCCC-CCCCCCEEEE
T ss_conf             5404877577887678833046545666789999987525511687787504667877652---31223-5678976999


Q ss_pred             EEEECCCCC--------------CC--------------CCCHHHHHHHHHHHHHCCCE-EEEEEECCCCCHHHHHHHCC
Q ss_conf             998404588--------------88--------------88978999999999978987-99999418642798998338
Q gi|254780833|r  288 IFLTDGENS--------------SP--------------NIDNKESLFYCNEAKRRGAI-VYAIGVQAEAADQFLKNCAS  338 (371)
Q Consensus       288 vl~TDG~~~--------------~~--------------~~~~~~~~~~c~~~k~~gi~-i~tIg~~~~~~~~~l~~cAs  338 (371)
                      ||.||+..+              ++              ..+.+...++...+++++|. ||+|.-......+.|...-.
T Consensus       247 v~~tD~~~H~agDg~l~gi~~pnd~~chl~~~~~y~~~~~~dyPs~~q~~~~l~~~~i~~ifavt~~~~~~y~~l~~~~~  326 (690)
T 3fcs_B          247 VFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIP  326 (690)
T ss_dssp             EEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEGGGHHHHHHHHHHST
T ss_pred             EEEECCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCC
T ss_conf             99806731125665423563167761140798852556767789999999999872967999976654006899997548


Q ss_pred             CCEEEEE-CCHH----HHHHHHHHHHHHHH
Q ss_conf             9808982-8989----99999999999640
Q gi|254780833|r  339 PDRFYSV-QNSR----KLHDAFLRIGKEMV  363 (371)
Q Consensus       339 ~~~~y~~-~~~~----~L~~af~~I~~~i~  363 (371)
                      ++..... .+..    =|.++|++|..++.
T Consensus       327 ~~~~~~l~~dssnv~~li~~~y~~~~s~v~  356 (690)
T 3fcs_B          327 GTTVGVLSMDSSNVLQLIVDAYGKIRSKVE  356 (690)
T ss_dssp             TCEEEEECTTCTTHHHHHHHHHHHHTTCEE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHHHCEEE
T ss_conf             752687057861599999999987526467