HHsearch results for GI: 254780833 and protein with PDBid: 3k6s_A
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.41 E-value=5.1e-13 Score=95.61 Aligned_cols=180 Identities=20% Similarity=0.299 Sum_probs=126.6
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCC--HHHHHHH
Q ss_conf 46740699852763115667872148989999987500233555531104798788636741781666558--7899999
Q gi|254780833|r 166 DIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAWG--VQHIQEK 243 (371)
Q Consensus 166 ~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~--~~~~~~~ 243 (371)
+..+|++|++|.|+|+... ....+++.+...+..++.. ..+++++.|+........|... .......
T Consensus 128 ~~~~DivfvlDgS~Si~~~------df~~~k~f~~~v~~~f~~~-----~~qvg~vqys~~~~~~f~l~d~~~~~~~~~~ 196 (1095)
T 3k6s_A 128 RQEQDIVFLIDGSGSISSR------NFATMMNFVRAVISQFQRP-----STQFSLMQFSNKFQTHFTFEEFRRSSNPLSL 196 (1095)
T ss_dssp CCCEEEEEEEECCTTSCSH------HHHHHHHHHHHHHHSSCSS-----SEEEEEEEESSSEEEEECSHHHHSCSCGGGG
T ss_pred CCCCCEEEEEECCCCCCCC------CHHHHHHHHHHHHHHCCCC-----CEEEEEEEECCCEEEEEEHHHCCCCCCHHHH
T ss_conf 6674379999089872743------0689999999998624667-----5499999613732588870343333026787
Q ss_pred HHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 74015-68874564237889999874211012346777666169999840458888889789999999999789879999
Q gi|254780833|r 244 INRLI-FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYAI 322 (371)
Q Consensus 244 i~~l~-~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~tI 322 (371)
++.+. .+|.|++..|+......++.. .....++..|+||++|||+-+............ ++..||.+|+|
T Consensus 197 v~~i~~~~g~T~Ta~ai~~~~~~~f~~------~~g~r~~a~kv~IviTDG~s~~d~~~l~~~i~~---~~~~gI~~~aI 267 (1095)
T 3k6s_A 197 LASVHQLQGFTYTATAIQNVVHRLFHA------SYGARRDAAKILIVITDGKKEGDSLDYKDVIPM---ADAAGIIRYAI 267 (1095)
T ss_dssp TTTCCCCCSCBCHHHHHHHHHTTTTST------TTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHH---HHHHCEEECCE
T ss_pred HHHEEECCCCCCHHHHHHHHHHHHHHH------HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH---HHHCCCEEEEE
T ss_conf 541461367430788899999976316------426888984179999268645673203444445---86489289999
Q ss_pred EECCC----CCHHHHHHHCC-C--CEEEEECCHHHHHHHHHHHHHHHHHE
Q ss_conf 94186----42798998338-9--80898289899999999999964000
Q gi|254780833|r 323 GVQAE----AADQFLKNCAS-P--DRFYSVQNSRKLHDAFLRIGKEMVKQ 365 (371)
Q Consensus 323 g~~~~----~~~~~l~~cAs-~--~~~y~~~~~~~L~~af~~I~~~i~~~ 365 (371)
|++.. .....|+.+|+ | .|+|.+++...|.+....+.++|...
T Consensus 268 Gvg~~~~~~~~~~eL~~iAs~p~~~~~f~v~~~~aL~~i~~~L~~~i~~i 317 (1095)
T 3k6s_A 268 GVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAI 317 (1095)
T ss_dssp EBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSCSGGGGSSTTTHHHHHHTC
T ss_pred ECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCEEE
T ss_conf 72543256433535421205887403899355577667777641652564