HHsearch alignment for GI: 254780834 and conserved domain: PRK06321
>PRK06321 replicative DNA helicase; Provisional.
Probab=96.70 E-value=0.1 Score=35.39 Aligned_cols=71 Identities=17% Similarity=0.168 Sum_probs=37.6
Q ss_pred CCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH------H
Q ss_conf 7858885010014655300103876765352101108178888643310000235678708997143889998------7
Q gi|254780834|r 214 RGQVIAFGGRTLSKGESVKYLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSL------C 287 (648)
Q Consensus 214 ~g~~i~f~gR~l~~~~~~KYlNSpeT~if~K~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l------~ 287 (648)
T Consensus 225 ~GdliviaaRP---s---------------mGKTalalnia~~~a~~~---------~~~v~~fSLEMs~~ql~~R~ls~ 277 (472)
T PRK06321 225 PSNLMILAARP---A---------------MGKTALALNIAENFCFQN---------RLPVGIFSLEMTVDQLIHRIICS 277 (472)
T ss_pred CCCEEEEECCC---C---------------CCHHHHHHHHHHHHHHHC---------CCCEEEECCCCCHHHHHHHHHHH
T ss_conf 67579985389---9---------------977999999999999856---------99469975779999999999874
Q ss_pred HCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 4355421134321366267898851
Q gi|254780834|r 288 QAGVQNVVSSLGTALTEYQLRLLWK 312 (648)
Q Consensus 288 ~~G~~n~va~~Gtalt~~~~~~l~r 312 (648)
T Consensus 278 ~s~i~~~~i~~g-~l~~~e~~~~~~ 301 (472)
T PRK06321 278 RSEVESKKISVG-DLSGRDFQRIVS 301 (472)
T ss_pred HCCCCCCCCCCC-CCCHHHHHHHHH
T ss_conf 037675521047-999999999999