HHsearch alignment for GI: 254780834 and conserved domain: PRK06321

>PRK06321 replicative DNA helicase; Provisional.
Probab=96.70  E-value=0.1  Score=35.39  Aligned_cols=71  Identities=17%  Similarity=0.168  Sum_probs=37.6

Q ss_pred             CCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHH------H
Q ss_conf             7858885010014655300103876765352101108178888643310000235678708997143889998------7
Q gi|254780834|r  214 RGQVIAFGGRTLSKGESVKYLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSL------C  287 (648)
Q Consensus       214 ~g~~i~f~gR~l~~~~~~KYlNSpeT~if~K~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l------~  287 (648)
T Consensus       225 ~GdliviaaRP---s---------------mGKTalalnia~~~a~~~---------~~~v~~fSLEMs~~ql~~R~ls~  277 (472)
T PRK06321        225 PSNLMILAARP---A---------------MGKTALALNIAENFCFQN---------RLPVGIFSLEMTVDQLIHRIICS  277 (472)
T ss_pred             CCCEEEEECCC---C---------------CCHHHHHHHHHHHHHHHC---------CCCEEEECCCCCHHHHHHHHHHH
T ss_conf             67579985389---9---------------977999999999999856---------99469975779999999999874


Q ss_pred             HCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf             4355421134321366267898851
Q gi|254780834|r  288 QAGVQNVVSSLGTALTEYQLRLLWK  312 (648)
Q Consensus       288 ~~G~~n~va~~Gtalt~~~~~~l~r  312 (648)
T Consensus       278 ~s~i~~~~i~~g-~l~~~e~~~~~~  301 (472)
T PRK06321        278 RSEVESKKISVG-DLSGRDFQRIVS  301 (472)
T ss_pred             HCCCCCCCCCCC-CCCHHHHHHHHH
T ss_conf             037675521047-999999999999