HHsearch alignment for GI: 254780834 and conserved domain: PRK08840
>PRK08840 replicative DNA helicase; Provisional.
Probab=96.84 E-value=0.085 Score=36.17 Aligned_cols=47 Identities=15% Similarity=0.131 Sum_probs=31.0
Q ss_pred CCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH
Q ss_conf 78588850100146553001038767653521011081788886433100002356787089971438899987
Q gi|254780834|r 214 RGQVIAFGGRTLSKGESVKYLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLC 287 (648)
Q Consensus 214 ~g~~i~f~gR~l~~~~~~KYlNSpeT~if~K~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l~ 287 (648)
T Consensus 216 ~G~LiviaaRP---sm---------------GKTalalnia~n~a~~~---------~~~v~~fSlEMs~~ql~ 262 (464)
T PRK08840 216 GSDLIIVAARP---SM---------------GKTTFAMNLCENAAMDQ---------DKPVLIFSLEMPAEQLM 262 (464)
T ss_pred CCCEEEEEECC---CC---------------CHHHHHHHHHHHHHHHC---------CCCEEEECCCCCHHHHH
T ss_conf 57679998379---87---------------36899999999999965---------99679976779989999