HHsearch alignment of GI: 254780834 and MMDB domain: 1d0q_A_23-69
>1d0q_A (A:23-69) DNA primase; zinc-binding motif, protein; HET: DNA; 1.71A {Bacillus stearothermophilus}
Probab=99.56 E-value=2.6e-15 Score=159.80 Aligned_cols=47 Identities=47% Similarity=1.025 Sum_probs=46.0
Q ss_pred HHHHCCCEECCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCC
Q ss_conf 5412221015887777755753458888587879817897467136888878
Q gi|254780834|r 21 IGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYYCFSCHVKGD 72 (648)
Q Consensus 21 v~~~v~l~~~g~n~~~~~~~~~cPfh~ektpsf~v~~~~~~~~cf~c~~~gd 72 (648)
||+||+|+|+|+| |||+||||+||||||+|+|+|++|||||||+|||
T Consensus 1 ig~~v~l~~~G~~-----~~~~CPfH~ek~PSf~V~~~k~~~~CFgCg~gGd 47 (47)
T 1d0q_A 1 IGEYVQLKRQGRN-----YFGLCPFHGEKTPSFSVSPEKQIFHCFGCGAGGN 47 (47)
T ss_dssp HTTTSCCEEETTE-----EEECCSSSCCSSCCEEEETTTTEEEETTTCCEEC
T ss_pred HHHCCCEEECCCC-----EEEECCCCCCCCCCEEECCCCCEEEEECCCCCCH
T ss_conf 9640786887966-----0787121279887438816841035630036633