HHsearch results for GI: 254780834 and protein with PDBid: 1t3w_A
>1t3w_A DNA primase; DNAG, DNA-directed RNA polymerase, E. coli, DNA replication; HET: DNA MSE; 2.80A {Escherichia coli} SCOP: a.236.1.1 PDB: 2haj_A*
Probab=96.43 E-value=0.036 Score=37.57 Aligned_cols=107 Identities=16% Similarity=0.095 Sum_probs=70.2
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998477889999844300-2379988999999999997538899989999885111289999999998654333
Q gi|254780834|r 484 EAALLLTLINHPAILQEQYQELAD-IRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQRLCERGFGELLKQLDRQVRDAGL 562 (648)
Q Consensus 484 E~~LL~llI~~P~l~~~~~e~l~~-~~f~~~~~~~L~~~i~~~~~~~~~~~~~~l~~~L~~~~l~elL~~L~~~~~~~~~ 562 (648)
-+.+|.++|+||++...+.. ... ..+..+.. .++..+++.+.+++..+...+..+..+....+.+..+......
T Consensus 18 ~r~aI~lLL~~P~la~~l~~-~~~l~~~~~~~~-~lL~~L~~~~~~~p~~~ta~Lle~~r~t~~~~~L~~La~~e~~--- 92 (148)
T 1t3w_A 18 MRILIGLLVQNPELATLVPP-LENLDENKLPGL-GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI--- 92 (148)
T ss_dssp HHHHHHHHHHCGGGGGGCCC-CTTSCGGGSTTH-HHHHHHHHHHHTSTTCCHHHHHHTTCSGGGHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHCCHHHHCCCC-HHHHHHCCCCCH-HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC---
T ss_conf 99999999859198761995-577755456113-9999999999858999999999998188389999999855566---
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2025689988999999999999985899999999999999
Q gi|254780834|r 563 WSATTEANIVDVRQGYQQALALYKRFRLLSRQKEEIEKQI 602 (648)
Q Consensus 563 ~~~~~e~~~~d~~e~~~~~l~l~~r~~~L~r~l~ele~~l 602 (648)
.+.++....+.+++.-+... .+..++..+....
T Consensus 93 ------~~~~~~~~ef~d~l~~L~~~-~~~~r~~~L~~k~ 125 (148)
T 1t3w_A 93 ------ADKNIAEQTFTDSLNHMFDS-LLELRQEELIARE 125 (148)
T ss_dssp ------HHHHHHHHHHHHHHHTTTHH-HHHHHHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf ------88068999999999999999-9999999999776