HHsearch results for GI: 254780834 and protein with PDBid: 1t6t_1
>1t6t_1 Putative protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, unknown function; 1.80A {Aquifex aeolicus VF5} SCOP: c.136.1.1
Probab=99.68 E-value=2.9e-17 Score=176.44 Aligned_cols=110 Identities=26% Similarity=0.344 Sum_probs=97.1
Q ss_pred HHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 01108178888643310000235678708997143889998743554211343213662678988512681899617886
Q gi|254780834|r 246 KNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDD 325 (648)
Q Consensus 246 ~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l~~~G~~n~va~~Gtalt~~~~~~l~r~~~~vvl~fDgD~ 325 (648)
+.+|+|+.+.+.+++. +.+.+|||||||||++||++||+|+||++||++|+ |+..+++...+||+|||+|+
T Consensus 3 ~~~~~l~e~~~~ir~~--------~~~~viiVEG~~D~~aL~~~Gi~n~va~~Gt~~~~-~~~~l~~~~~~Vil~~D~D~ 73 (118)
T 1t6t_1 3 KEPRNLSEWIKELKKA--------SREAVILVEGKNDKKALSKFSIKNVIDLSGKRYAD-VVDMLEGKWEKVILLFDLDT 73 (118)
T ss_dssp --CCSHHHHHHHHHHH--------TTTSEEEESSHHHHHHHHTTTCCCEEECTTSCHHH-HHHHHTTTCSEEEECCCSSH
T ss_pred CCHHHHHHHHHHHHHC--------CCCCEEEECCHHHHHHHHHCCCCHHHHCCCCCHHH-HHHHHHHCCCEEEEEECCCH
T ss_conf 3224189999999965--------89978997389999999981652323016865599-99999864893899867888
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHHHH
Q ss_conf 6225777888888777536973067525788888899720366889988
Q gi|254780834|r 326 PGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSFIRCYGKTAFEKL 374 (648)
Q Consensus 326 AG~kAa~Ra~e~~l~~l~~g~~v~vv~LP~G~DPDe~ir~~G~eaf~~l 374 (648)
||++|+.|..+.+. ..|+.|. .|||+++++.|...++++
T Consensus 74 aG~~~~~k~~~~L~---~~g~~v~-------~d~~~~l~~~g~~~ieel 112 (118)
T 1t6t_1 74 HGERINQKMKELLS---SQGFLVD-------ENFRNFLKKWNIIHIEEI 112 (118)
T ss_dssp HHHHHHHHHHHHHH---HTTCEEE-------CHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHHHHHHHH---HCCCCCC-------CCHHHHHHHCCHHHHHHH
T ss_conf 89999999999999---8779137-------599999988196999863