BLAST/PSIBLAST alignment of GI: 254780834 and GI: 325293529 at iteration 1
>gi|325293529|ref|YP_004279393.1| DNA primase [Agrobacterium sp. H13-3] Length = 661
>gi|325061382|gb|ADY65073.1| DNA primase [Agrobacterium sp. H13-3] Length = 661
 Score =  608 bits (1568), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/667 (46%), Positives = 435/667 (65%), Gaps = 33/667 (4%)

Query: 1   MNYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKG 60
           M +   F+ ++   + IS++IG+ V WD++KTN  +GDYWACCPFH EK+PSFHC D KG
Sbjct: 1   MRFSNSFLDEIRDRVNISDVIGRRVSWDKKKTNTPRGDYWACCPFHGEKSPSFHCEDRKG 60

Query: 61  FYYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRL 120
            Y+CF C V GDH  FL+ L G SF E+VQ++A +AG+ +P  DP+ EK+E+ +T L  +
Sbjct: 61  RYHCFGCGVSGDHFRFLTDLEGLSFPEAVQQIADMAGISMPQPDPQAEKRERERTSLQDV 120

Query: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180
           +E+AT FF   L+ A   R   YL +RG+    IE F+LG+APDSR +L+EHL  KG + 
Sbjct: 121 MEMATLFFQDQLQTALGARARAYLRDRGLTGRTIETFRLGFAPDSRNALKEHLASKGVAR 180

Query: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240
           E++   GL++  +N   SYDRFR+R++FPI SSR +VIAFGGR ++     KYLNS ET 
Sbjct: 181 EQMEACGLVVH-ENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMAADAVAKYLNSNETE 239

Query: 241 LFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGT 300
           LFHKG  LYNF  A    Q          S   +I VEGYMDV++L QAGV+N V+ LGT
Sbjct: 240 LFHKGNVLYNFARARRASQA---------SGGTVIAVEGYMDVIALYQAGVENAVAPLGT 290

Query: 301 ALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPD 360
           ALTE QL LLWK+SP+ +LCFDGD  G+RAA +A DL L H+ P   V+F LL  G+DPD
Sbjct: 291 ALTESQLDLLWKMSPQPILCFDGDGAGIRAANRAADLALPHIKPDRSVSFALLPDGKDPD 350

Query: 361 SFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKL 420
             +R  G+  F++++ E+ PL  M+W RET + +F+TP++RA+LE  L+  +  I D+ +
Sbjct: 351 DLVRLEGRAPFDRVLSEAKPLAAMIWSRETSSVTFDTPEKRAQLESRLRQIVAVIGDEAV 410

Query: 421 RYYYSQAIRDRLQQLFQKYITE------------HSGYGRYWKKNARHRD--QKGP---- 462
           R +Y Q +RDRL   FQ    +              G GR +++NA  R      P    
Sbjct: 411 RRFYQQDMRDRLNAFFQPRFQQGGSQGGNFRRDGQQGNGRGFQRNASGRGGAMAAPASNI 470

Query: 463 SQRLMQSSLVKGKLSKKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFL 522
           S RL QS LV+G  + KPSLRE+ L +T++NHP +L E+Y E+A I Y+N +LQ+LWS +
Sbjct: 471 SDRLTQSGLVRGHQT-KPSLRESVLAITIVNHPELLLEEYDEIAAIDYENRDLQRLWSTV 529

Query: 523 FSDFVEQKYFLPEE-IHQRLCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQA 581
            +   E    +    + +RL ++GF  LLK +D+QVR+A LW+AT +A + D R+GY QA
Sbjct: 530 LTFAAESAAEISRAGLIERLSQQGFEVLLKTMDQQVRNARLWTATEQAALEDAREGYVQA 589

Query: 582 LALYKRFRLLSRQKEEIEKQIAQVTAKGEAEKTAILISILHEVHIQIHQIESQEAMIEGF 641
           L+L+KR + L  QK E+E++I + T   + E+  +L+  L EV ++I ++E+QEA+I+GF
Sbjct: 590 LSLHKRTKSLLWQKRELEREIGEAT---DDERGTLLVRALAEVQLEIGRMENQEAIIDGF 646

Query: 642 GKMSGRL 648
           G MSGR+
Sbjct: 647 GVMSGRV 653