BLAST/PSIBLAST alignment of GI: 254780834 and GI: 325293529 at iteration 1
>gi|325293529|ref|YP_004279393.1| DNA primase [Agrobacterium sp. H13-3] Length = 661
>gi|325061382|gb|ADY65073.1| DNA primase [Agrobacterium sp. H13-3] Length = 661
Score = 608 bits (1568), Expect = e-172, Method: Compositional matrix adjust.
Identities = 307/667 (46%), Positives = 435/667 (65%), Gaps = 33/667 (4%)
Query: 1 MNYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKG 60
M + F+ ++ + IS++IG+ V WD++KTN +GDYWACCPFH EK+PSFHC D KG
Sbjct: 1 MRFSNSFLDEIRDRVNISDVIGRRVSWDKKKTNTPRGDYWACCPFHGEKSPSFHCEDRKG 60
Query: 61 FYYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRL 120
Y+CF C V GDH FL+ L G SF E+VQ++A +AG+ +P DP+ EK+E+ +T L +
Sbjct: 61 RYHCFGCGVSGDHFRFLTDLEGLSFPEAVQQIADMAGISMPQPDPQAEKRERERTSLQDV 120
Query: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180
+E+AT FF L+ A R YL +RG+ IE F+LG+APDSR +L+EHL KG +
Sbjct: 121 MEMATLFFQDQLQTALGARARAYLRDRGLTGRTIETFRLGFAPDSRNALKEHLASKGVAR 180
Query: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240
E++ GL++ +N SYDRFR+R++FPI SSR +VIAFGGR ++ KYLNS ET
Sbjct: 181 EQMEACGLVVH-ENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMAADAVAKYLNSNETE 239
Query: 241 LFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGT 300
LFHKG LYNF A Q S +I VEGYMDV++L QAGV+N V+ LGT
Sbjct: 240 LFHKGNVLYNFARARRASQA---------SGGTVIAVEGYMDVIALYQAGVENAVAPLGT 290
Query: 301 ALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPD 360
ALTE QL LLWK+SP+ +LCFDGD G+RAA +A DL L H+ P V+F LL G+DPD
Sbjct: 291 ALTESQLDLLWKMSPQPILCFDGDGAGIRAANRAADLALPHIKPDRSVSFALLPDGKDPD 350
Query: 361 SFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKL 420
+R G+ F++++ E+ PL M+W RET + +F+TP++RA+LE L+ + I D+ +
Sbjct: 351 DLVRLEGRAPFDRVLSEAKPLAAMIWSRETSSVTFDTPEKRAQLESRLRQIVAVIGDEAV 410
Query: 421 RYYYSQAIRDRLQQLFQKYITE------------HSGYGRYWKKNARHRD--QKGP---- 462
R +Y Q +RDRL FQ + G GR +++NA R P
Sbjct: 411 RRFYQQDMRDRLNAFFQPRFQQGGSQGGNFRRDGQQGNGRGFQRNASGRGGAMAAPASNI 470
Query: 463 SQRLMQSSLVKGKLSKKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFL 522
S RL QS LV+G + KPSLRE+ L +T++NHP +L E+Y E+A I Y+N +LQ+LWS +
Sbjct: 471 SDRLTQSGLVRGHQT-KPSLRESVLAITIVNHPELLLEEYDEIAAIDYENRDLQRLWSTV 529
Query: 523 FSDFVEQKYFLPEE-IHQRLCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQA 581
+ E + + +RL ++GF LLK +D+QVR+A LW+AT +A + D R+GY QA
Sbjct: 530 LTFAAESAAEISRAGLIERLSQQGFEVLLKTMDQQVRNARLWTATEQAALEDAREGYVQA 589
Query: 582 LALYKRFRLLSRQKEEIEKQIAQVTAKGEAEKTAILISILHEVHIQIHQIESQEAMIEGF 641
L+L+KR + L QK E+E++I + T + E+ +L+ L EV ++I ++E+QEA+I+GF
Sbjct: 590 LSLHKRTKSLLWQKRELEREIGEAT---DDERGTLLVRALAEVQLEIGRMENQEAIIDGF 646
Query: 642 GKMSGRL 648
G MSGR+
Sbjct: 647 GVMSGRV 653