BLAST/PSIBLAST alignment of GI: 254780834 and GI: 86358556 at iteration 1
>gi|86358556|ref|YP_470448.1| DNA primase [Rhizobium etli CFN 42] Length = 665
>gi|86282658|gb|ABC91721.1| DNA primase protein [Rhizobium etli CFN 42] Length = 665
 Score =  635 bits (1637), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 321/661 (48%), Positives = 428/661 (64%), Gaps = 15/661 (2%)

Query: 1   MNYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKG 60
           M +   F+ ++   +PISN+I + V WD+RKTN  +GDYWACCPFH EK+PSFHC D KG
Sbjct: 1   MRFSNTFLDEIRDRVPISNVIARRVSWDKRKTNVSRGDYWACCPFHGEKSPSFHCEDRKG 60

Query: 61  FYYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRL 120
            Y+CF C V GDH  FL+ L G SF E+VQ++A +AGVP+P+ DP +EK+EK +  LI +
Sbjct: 61  RYHCFGCGVTGDHFRFLTELEGLSFPEAVQQIADMAGVPMPLADPVMEKREKERGSLIDV 120

Query: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180
           +E+AT FF   L+ A   +   YL +RG+    IE F+LGYAPDSR +L+E L  KG S+
Sbjct: 121 MEMATSFFQDQLQTANGAKARAYLRDRGLTGRTIETFRLGYAPDSRNALKEFLAGKGVSK 180

Query: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240
           E+I   GL++  +N   SYDRFR+R++FPI SSR +VIAFGGR +S     KYLNS ET 
Sbjct: 181 EQIEACGLVVH-ENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMSSDAPAKYLNSNETE 239

Query: 241 LFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGT 300
           LFHKG  LYNF  A   +Q   R D   N+S  II VEGYMDV++L QAG++N V+ LGT
Sbjct: 240 LFHKGNVLYNFARARRAIQGPGRGDQDDNASGTIIAVEGYMDVIALYQAGIENAVAPLGT 299

Query: 301 ALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPD 360
           ALTE QL LLWK+ P+ VLCFDGD  G+RAA +A +L L HL PG  V F LL  G+DPD
Sbjct: 300 ALTENQLELLWKMVPQPVLCFDGDGAGIRAANRAAELALPHLKPGRSVRFALLPDGKDPD 359

Query: 361 SFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKL 420
             +R  G+  F+K++ ++ PL +MLW RE     F+TP+ RAELE  LK  +  I D+ +
Sbjct: 360 DLVRDEGRAPFDKVMSQAKPLSEMLWSREINTGKFDTPEARAELEARLKQLVAVIGDENV 419

Query: 421 RYYYSQAIRDRLQQLFQKYITEH--------SGYGRYWKKNARHRDQKGP---SQRLMQS 469
           R +Y Q IRDRL   FQ              SG  R  + NA     K P   S RL +S
Sbjct: 420 RRHYQQDIRDRLNAFFQPQFQNRNSGERRGFSGSPRNGRDNAAKAGPKSPSLISDRLARS 479

Query: 470 SLVKGKLSKKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQ 529
             V+G      +LRE+ L LT++NHPA++ + Y E+A I YD+ ELQ+LWS +       
Sbjct: 480 GPVRGHRDNT-ALRESVLALTIVNHPALMIDDYDEIAAIEYDSRELQRLWSAMLGAAAAV 538

Query: 530 --KYFLPEEIHQRLCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKR 587
              +   E + +RL   GFG L+K LD+QVR+A LW+AT EA + D R+GY+QALA +KR
Sbjct: 539 AGPHLTREYLTERLEFEGFGPLIKSLDQQVRNARLWTATEEAAMEDAREGYRQALAFHKR 598

Query: 588 FRLLSRQKEEIEKQIAQVTAKGEAEKTAILISILHEVHIQIHQIESQEAMIEGFGKMSGR 647
            + L RQK E+E++IA  T  G+ E    LI    EVH++  ++E+QEA+I+GFG +SGR
Sbjct: 599 AKALRRQKMELEREIALATEAGDGEAIVQLIRAQQEVHLEGVRLENQEAIIDGFGVLSGR 658

Query: 648 L 648
           +
Sbjct: 659 V 659