BLAST/PSIBLAST alignment of GI: 254780834 and GI: 86358556 at iteration 1
>gi|86358556|ref|YP_470448.1| DNA primase [Rhizobium etli CFN 42] Length = 665
>gi|86282658|gb|ABC91721.1| DNA primase protein [Rhizobium etli CFN 42] Length = 665
Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust.
Identities = 321/661 (48%), Positives = 428/661 (64%), Gaps = 15/661 (2%)
Query: 1 MNYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKG 60
M + F+ ++ +PISN+I + V WD+RKTN +GDYWACCPFH EK+PSFHC D KG
Sbjct: 1 MRFSNTFLDEIRDRVPISNVIARRVSWDKRKTNVSRGDYWACCPFHGEKSPSFHCEDRKG 60
Query: 61 FYYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRL 120
Y+CF C V GDH FL+ L G SF E+VQ++A +AGVP+P+ DP +EK+EK + LI +
Sbjct: 61 RYHCFGCGVTGDHFRFLTELEGLSFPEAVQQIADMAGVPMPLADPVMEKREKERGSLIDV 120
Query: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180
+E+AT FF L+ A + YL +RG+ IE F+LGYAPDSR +L+E L KG S+
Sbjct: 121 MEMATSFFQDQLQTANGAKARAYLRDRGLTGRTIETFRLGYAPDSRNALKEFLAGKGVSK 180
Query: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240
E+I GL++ +N SYDRFR+R++FPI SSR +VIAFGGR +S KYLNS ET
Sbjct: 181 EQIEACGLVVH-ENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMSSDAPAKYLNSNETE 239
Query: 241 LFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGT 300
LFHKG LYNF A +Q R D N+S II VEGYMDV++L QAG++N V+ LGT
Sbjct: 240 LFHKGNVLYNFARARRAIQGPGRGDQDDNASGTIIAVEGYMDVIALYQAGIENAVAPLGT 299
Query: 301 ALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPD 360
ALTE QL LLWK+ P+ VLCFDGD G+RAA +A +L L HL PG V F LL G+DPD
Sbjct: 300 ALTENQLELLWKMVPQPVLCFDGDGAGIRAANRAAELALPHLKPGRSVRFALLPDGKDPD 359
Query: 361 SFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKL 420
+R G+ F+K++ ++ PL +MLW RE F+TP+ RAELE LK + I D+ +
Sbjct: 360 DLVRDEGRAPFDKVMSQAKPLSEMLWSREINTGKFDTPEARAELEARLKQLVAVIGDENV 419
Query: 421 RYYYSQAIRDRLQQLFQKYITEH--------SGYGRYWKKNARHRDQKGP---SQRLMQS 469
R +Y Q IRDRL FQ SG R + NA K P S RL +S
Sbjct: 420 RRHYQQDIRDRLNAFFQPQFQNRNSGERRGFSGSPRNGRDNAAKAGPKSPSLISDRLARS 479
Query: 470 SLVKGKLSKKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQ 529
V+G +LRE+ L LT++NHPA++ + Y E+A I YD+ ELQ+LWS +
Sbjct: 480 GPVRGHRDNT-ALRESVLALTIVNHPALMIDDYDEIAAIEYDSRELQRLWSAMLGAAAAV 538
Query: 530 --KYFLPEEIHQRLCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKR 587
+ E + +RL GFG L+K LD+QVR+A LW+AT EA + D R+GY+QALA +KR
Sbjct: 539 AGPHLTREYLTERLEFEGFGPLIKSLDQQVRNARLWTATEEAAMEDAREGYRQALAFHKR 598
Query: 588 FRLLSRQKEEIEKQIAQVTAKGEAEKTAILISILHEVHIQIHQIESQEAMIEGFGKMSGR 647
+ L RQK E+E++IA T G+ E LI EVH++ ++E+QEA+I+GFG +SGR
Sbjct: 599 AKALRRQKMELEREIALATEAGDGEAIVQLIRAQQEVHLEGVRLENQEAIIDGFGVLSGR 658
Query: 648 L 648
+
Sbjct: 659 V 659