PSIBLAST alignment of GI: 254780834 and protein with PDB id: 1dd9
>gi|7767196|pdb|1DD9|A Chain A, Structure Of The Dnag Catalytic Core Length = 338
>gi|7767197|pdb|1DDE|A Chain A, Structure Of The Dnag Catalytic Core Length = 338
Score = 181 bits (458), Expect = 4e-43, Method: Composition-based stats.
Identities = 111/331 (33%), Positives = 182/331 (54%), Gaps = 12/331 (3%)
Query: 113 IQTDLIRLIEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREH 172
+ L +L++ F+ SL+ YL++RG+ I F +G+AP ++ +
Sbjct: 17 QRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKR 76
Query: 173 LRQKGFSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVK 232
+ + +I+AG+L+ ++ SYDRFR R++FPIR RG+VI FGGR L ++ K
Sbjct: 77 FGGNPENRQSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPK 134
Query: 233 YLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQ 292
YLNSPET +FHKG+ LY + A + R +++VEGYMDV++L Q G+
Sbjct: 135 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNR----------LLVVEGYMDVVALAQYGIN 184
Query: 293 NVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVL 352
V+SLGT+ T ++LL++ + ++ C+DGD G AA++A++ L ++ G ++ F+
Sbjct: 185 YAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMF 244
Query: 353 LSRGEDPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCI 412
L GEDPD+ +R GK AFE + +++PL L+ +TPD RA L I
Sbjct: 245 LPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLI 304
Query: 413 NHIKDQKLRYYYSQAIRDRLQQLFQKYITEH 443
+ + + LR Y Q + ++L L +
Sbjct: 305 SQVPGETLRIYLRQELGNKLGILDDSQLERL 335