PSIBLAST alignment of GI: 254780834 and protein with PDB id: 1dd9

>gi|7767196|pdb|1DD9|A Chain A, Structure Of The Dnag Catalytic Core Length = 338
>gi|7767197|pdb|1DDE|A Chain A, Structure Of The Dnag Catalytic Core Length = 338
 Score =  181 bits (458), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 111/331 (33%), Positives = 182/331 (54%), Gaps = 12/331 (3%)

Query: 113 IQTDLIRLIEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREH 172
            +  L +L++    F+  SL+         YL++RG+    I  F +G+AP    ++ + 
Sbjct: 17  QRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKR 76

Query: 173 LRQKGFSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVK 232
                 + + +I+AG+L+  ++   SYDRFR R++FPIR  RG+VI FGGR L   ++ K
Sbjct: 77  FGGNPENRQSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPK 134

Query: 233 YLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQ 292
           YLNSPET +FHKG+ LY  + A     +  R          +++VEGYMDV++L Q G+ 
Sbjct: 135 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNR----------LLVVEGYMDVVALAQYGIN 184

Query: 293 NVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVL 352
             V+SLGT+ T   ++LL++ +  ++ C+DGD  G  AA++A++  L ++  G ++ F+ 
Sbjct: 185 YAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMF 244

Query: 353 LSRGEDPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCI 412
           L  GEDPD+ +R  GK AFE  + +++PL   L+         +TPD RA L       I
Sbjct: 245 LPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLI 304

Query: 413 NHIKDQKLRYYYSQAIRDRLQQLFQKYITEH 443
           + +  + LR Y  Q + ++L  L    +   
Sbjct: 305 SQVPGETLRIYLRQELGNKLGILDDSQLERL 335