PSIBLAST alignment of GI: 254780834 and protein with PDB id: 2au3

>gi|83754038|pdb|2AU3|A Chain A, Crystal Structure Of The Aquifex Aeolicus Primase (Zinc Binding And Rna Polymerase Domains) Length = 407
 Score =  249 bits (636), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 133/440 (30%), Positives = 202/440 (45%), Gaps = 37/440 (8%)

Query: 6   DFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYYCF 65
             I +L   I I ++I +Y++ ++  +N     Y   CPFH + TPSF+ + SK  + CF
Sbjct: 5   SDIDELRREIDIVDVISEYLNLEKVGSN-----YRTNCPFHPDDTPSFYVSPSKQIFKCF 59

Query: 66  SCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRLIEVAT 125
            C V GD + F+S     S+ E+   LA   G  L        +K      +   ++   
Sbjct: 60  GCGVGGDAIKFVSLYEDISYFEAALELAKRYGKKL------DLEKISKDEKVYVALDRVC 113

Query: 126 DFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEEKIIE 185
           DF+  SL   R+     Y+  RGID      F LGYAP S   ++     K     +   
Sbjct: 114 DFYRESLLKNREASE--YVKSRGIDPKVARKFDLGYAPSSEALVKVL---KENDLLEAYL 168

Query: 186 AGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETILFHKG 245
               +         D F  R++ PI+  RG+VI FGGR + + +S KY+NSP++ +F KG
Sbjct: 169 ETKNLLSPTKGVYRDLFLRRVVIPIKDPRGRVIGFGGRRIVEDKSPKYINSPDSRVFKKG 228

Query: 246 KNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTALTEY 305
           +NL+  + A  Y++             F ILVEGY D+L L   G++NVV+ LGTALT+ 
Sbjct: 229 ENLFGLYEAKEYIK----------EEGFAILVEGYFDLLRLFSEGIRNVVAPLGTALTQN 278

Query: 306 QLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSFIRC 365
           Q  LL K + ++ + +DGDD G +A   AI L    L  G  V  V L  G DPD FI+ 
Sbjct: 279 QANLLSKFTKKVYILYDGDDAGRKAMKSAIPL---LLSAGVEVYPVYLPEGYDPDEFIKE 335

Query: 366 YGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLRYYYS 425
           +GK    +LI  S  L + L K           +   E     +  +  I D   R+  +
Sbjct: 336 FGKEELRRLINSSGELFETLIKTAR--------ENLEEKTREFRYYLGFISDGVRRFALA 387

Query: 426 QAIRDRLQQLFQKYITEHSG 445
                + +   +  + +   
Sbjct: 388 SEFHTKYKVPMEILLMKIEK 407