RPSBLAST alignment for GI: 254780834 and conserved domain: TIGR01391

>gnl|CDD|162334 TIGR01391, dnaG, DNA primase, catalytic core. This protein contains a CHC2 zinc finger (Pfam:PF01807) and a Toprim domain (Pfam:PF01751). Length = 415
 Score =  430 bits (1108), Expect = e-121
 Identities = 184/435 (42%), Positives = 254/435 (58%), Gaps = 24/435 (5%)

Query: 2   NYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGF 61
             P +FI +L   + I ++I +YV   ++  N     Y   CPFH EKTPSF  +  K F
Sbjct: 1   MIPEEFIDELKERVDIVDVISEYVKLKKKGRN-----YVGLCPFHHEKTPSFSVSPEKQF 55

Query: 62  YYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTD--LIR 119
           Y+CF C   GD + FL  + G SF+E+V+ LA  AG+ LP    + EKKE+      L  
Sbjct: 56  YHCFGCGAGGDAIKFLMEIEGISFVEAVEELAKRAGIDLPFEKDQQEKKEQKSKRKKLYE 115

Query: 120 LIEVATDFFHHSLKNARDKRLHY-YLDERGIDSHAIEMFKLGYAPDSRYSLREHL-RQKG 177
           L+E+A  FF + LK+  + R    YL  RG+    I+ F+LGYAP++   L + L  +KG
Sbjct: 116 LLELAAKFFKNQLKHTPENRAALDYLQSRGLSDETIDRFELGYAPNNWDFLFDFLQNKKG 175

Query: 178 FSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSP 237
           F  E + EAGLL+  +N    YDRFRNR++FPI   +G+V+ FGGR L   E  KYLNSP
Sbjct: 176 FDLELLAEAGLLVKKENGKY-YDRFRNRIMFPIHDPKGRVVGFGGRAL-GDEKPKYLNSP 233

Query: 238 ETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSS 297
           ET LF K + LY    A    +K IRK+        +ILVEGYMDV++L QAG++N V+S
Sbjct: 234 ETPLFKKSELLYGLHKA----RKEIRKEKE------LILVEGYMDVIALHQAGIKNAVAS 283

Query: 298 LGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGE 357
           LGTALTE  ++LL + +  I+LCFDGD  G +AA +AI+L+L   I    V  + L  G+
Sbjct: 284 LGTALTEEHIKLLKRYADEIILCFDGDKAGRKAALRAIELLLPLGI---NVKVIKLPGGK 340

Query: 358 DPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKD 417
           DPD ++R  G  A +KL+  S  L++ L  R   N + +TP+E+A+L   L   I  I D
Sbjct: 341 DPDEYLRKEGVEALKKLLENSKSLIEFLIARLLSNYNLDTPEEKAKLVEELLPLIKKIPD 400

Query: 418 QKLRYYYSQAIRDRL 432
             LR YY Q +   L
Sbjct: 401 PILRDYYLQKLAQLL 415