RPSBLAST alignment for GI: 254780834 and conserved domain: TIGR01391
>gnl|CDD|162334 TIGR01391, dnaG, DNA primase, catalytic core. This protein contains a CHC2 zinc finger (Pfam:PF01807) and a Toprim domain (Pfam:PF01751). Length = 415
Score = 430 bits (1108), Expect = e-121
Identities = 184/435 (42%), Positives = 254/435 (58%), Gaps = 24/435 (5%)
Query: 2 NYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGF 61
P +FI +L + I ++I +YV ++ N Y CPFH EKTPSF + K F
Sbjct: 1 MIPEEFIDELKERVDIVDVISEYVKLKKKGRN-----YVGLCPFHHEKTPSFSVSPEKQF 55
Query: 62 YYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTD--LIR 119
Y+CF C GD + FL + G SF+E+V+ LA AG+ LP + EKKE+ L
Sbjct: 56 YHCFGCGAGGDAIKFLMEIEGISFVEAVEELAKRAGIDLPFEKDQQEKKEQKSKRKKLYE 115
Query: 120 LIEVATDFFHHSLKNARDKRLHY-YLDERGIDSHAIEMFKLGYAPDSRYSLREHL-RQKG 177
L+E+A FF + LK+ + R YL RG+ I+ F+LGYAP++ L + L +KG
Sbjct: 116 LLELAAKFFKNQLKHTPENRAALDYLQSRGLSDETIDRFELGYAPNNWDFLFDFLQNKKG 175
Query: 178 FSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSP 237
F E + EAGLL+ +N YDRFRNR++FPI +G+V+ FGGR L E KYLNSP
Sbjct: 176 FDLELLAEAGLLVKKENGKY-YDRFRNRIMFPIHDPKGRVVGFGGRAL-GDEKPKYLNSP 233
Query: 238 ETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSS 297
ET LF K + LY A +K IRK+ +ILVEGYMDV++L QAG++N V+S
Sbjct: 234 ETPLFKKSELLYGLHKA----RKEIRKEKE------LILVEGYMDVIALHQAGIKNAVAS 283
Query: 298 LGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGE 357
LGTALTE ++LL + + I+LCFDGD G +AA +AI+L+L I V + L G+
Sbjct: 284 LGTALTEEHIKLLKRYADEIILCFDGDKAGRKAALRAIELLLPLGI---NVKVIKLPGGK 340
Query: 358 DPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKD 417
DPD ++R G A +KL+ S L++ L R N + +TP+E+A+L L I I D
Sbjct: 341 DPDEYLRKEGVEALKKLLENSKSLIEFLIARLLSNYNLDTPEEKAKLVEELLPLIKKIPD 400
Query: 418 QKLRYYYSQAIRDRL 432
LR YY Q + L
Sbjct: 401 PILRDYYLQKLAQLL 415