HHsearch alignment for GI: 254780836 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=99.21 E-value=4.1e-11 Score=91.98 Aligned_cols=87 Identities=23% Similarity=0.397 Sum_probs=60.6
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHH------------------------------HCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 403117665404689999999998531------------------------------00533322550466667889999
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVADCGS------------------------------HHKIPPILVPHGQELEPETHAVC 255 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~------------------------------~~~~~~~~~lyGQEin~~tyaIa 255 (674)
T Consensus 192 ~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~~-~~~G~Did~r~i~~A 270 (381)
T COG0116 192 DEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKELP-IIYGSDIDPRHIEGA 270 (381)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCHHHHHHH
T ss_conf 9834168877347999999734456876332200455432138889999999999865147666-589874898999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 999898088753345666682347----5457999866418999816856765
Q gi|254780836|r 256 VAGMLIRRLESDPRRDLSKNIQQG----STLSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 256 k~nMli~g~~~d~~~~~~~NI~~G----dTL~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
T Consensus 271 k~NA~~AGv~d~--------I~f~~~d~~~l~~~~---~~~gvvI~NPPYGeR 312 (381)
T COG0116 271 KANARAAGVGDL--------IEFKQADATDLKEPL---EEYGVVISNPPYGER 312 (381)
T ss_pred HHHHHHCCCCCE--------EEEEECCHHHCCCCC---CCCCEEEECCCCHHH
T ss_conf 998997698832--------899974432166876---669989958983011