HHsearch alignment for GI: 254780836 and conserved domain: COG2264

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis].
Probab=96.44  E-value=0.021  Score=35.21  Aligned_cols=96  Identities=17%  Similarity=0.167  Sum_probs=64.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf             65753681799999999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r  173 GAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH  252 (674)
Q Consensus       173 ~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty  252 (674)
T Consensus       142 GTG~HpTT~lcL~~Le~~~----------~--~g~~vlDvGcGSGILaIAa~-kL-------G---A~~v~g~DiDp~AV  198 (300)
T COG2264         142 GTGTHPTTSLCLEALEKLL----------K--KGKTVLDVGCGSGILAIAAA-KL-------G---AKKVVGVDIDPQAV  198 (300)
T ss_pred             CCCCCHHHHHHHHHHHHHH----------C--CCCEEEEECCCHHHHHHHHH-HC-------C---CCEEEEECCCHHHH
T ss_conf             7887801799999999860----------5--89879982678159999999-81-------9---86689971888999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf             99999989808875334566668234754579998664189998168
Q gi|254780836|r  253 AVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNP  299 (674)
Q Consensus       253 aIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNP  299 (674)
T Consensus       199 ~aa~eNa~~N~v~~~------~~~~~~~~~~--~~~~~~~DvIVANI  237 (300)
T COG2264         199 EAARENARLNGVELL------VQAKGFLLLE--VPENGPFDVIVANI  237 (300)
T ss_pred             HHHHHHHHHCCCCHH------HHCCCCCCHH--HCCCCCCCEEEEHH
T ss_conf             999999997699602------2003456300--01368656898605