HHsearch alignment for GI: 254780836 and conserved domain: COG2520

Probab=96.19  E-value=0.0086  Score=37.71  Aligned_cols=97  Identities=12%  Similarity=0.083  Sum_probs=64.0

Q ss_pred             CCCCHHHHHH--HHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf             5368179999--99997317840110138776403117665404689999999998531005333225504666678899
Q gi|254780836|r  176 DFMTPRDVVH--LATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHA  253 (674)
Q Consensus       176 effTPR~Vi~--Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tya  253 (674)
T Consensus       169 v~Fsprl~~ER~Rva~~v------------~~GE~V~DmFAGVGpfsi~~Ak~g-----------~~~V~A~diNP~A~~  225 (341)
T COG2520         169 VYFSPRLSTERARVAELV------------KEGETVLDMFAGVGPFSIPIAKKG-----------RPKVYAIDINPDAVE  225 (341)
T ss_pred             EEECCCCHHHHHHHHHHH------------CCCCEEEECCCCCCCCHHHHHHCC-----------CCEEEEEECCHHHHH
T ss_conf             487787447899998630------------699889983578654012466547-----------863999945989999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             9999989808875334566668234754579998664189998168567
Q gi|254780836|r  254 VCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFG  302 (674)
Q Consensus       254 Iak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg  302 (674)
T Consensus       226 ~L~eNi~LN~v~~~------v~~i~gD~rev~~~~-~~aDrIim~~p~~  267 (341)
T COG2520         226 YLKENIRLNKVEGR------VEPILGDAREVAPEL-GVADRIIMGLPKS  267 (341)
T ss_pred             HHHHHHHHCCCCCE------EEEEECCHHHHHHCC-CCCCEEEECCCCC
T ss_conf             99999985576551------567966488850204-6678898389872