HHsearch alignment for GI: 254780836 and conserved domain: KOG3420
>KOG3420 consensus.
Probab=97.98 E-value=1.8e-05 Score=55.18 Aligned_cols=105 Identities=21% Similarity=0.318 Sum_probs=71.1
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf 57536817999999997317840110138776403117665404689999999998531005333225504666678899
Q gi|254780836|r 174 AEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHA 253 (674)
Q Consensus 174 aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tya 253 (674)
T Consensus 23 LEQY~T~p~iAasM~~~Ih~Tygdi----Eg--kkl~DLgcgcG-mLs~a~sm~-----~-----~e~vlGfDIdpeALE 85 (185)
T KOG3420 23 LEQYPTRPHIAASMLYTIHNTYGDI----EG--KKLKDLGCGCG-MLSIAFSMP-----K-----NESVLGFDIDPEALE 85 (185)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHCCC----CC--CCHHHHCCCHH-HHHHHHHCC-----C-----CCEEEEEECCHHHHH
T ss_conf 5517996789999999998620120----47--46225247611-567775057-----8-----733786405889999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 999998980887533456666823475457999866418999816856765
Q gi|254780836|r 254 VCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 254 Iak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
T Consensus 86 If~rNaeEfEvqi--------dlLqcd-ildle~~~g~fDtaviNppFGTk 127 (185)
T KOG3420 86 IFTRNAEEFEVQI--------DLLQCD-ILDLELKGGIFDTAVINPPFGTK 127 (185)
T ss_pred HHHHCHHHHHHHH--------HEEEEE-CCCHHCCCCEEEEEEECCCCCCC
T ss_conf 9861668752334--------212222-15511058767667866898764