HHsearch alignment for GI: 254780836 and conserved domain: PRK08317
>PRK08317 hypothetical protein; Provisional.
Probab=97.37 E-value=0.0025 Score=41.20 Aligned_cols=197 Identities=17% Similarity=0.159 Sum_probs=102.1
Q ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 87764031176654046899999999985310053332255046666788999999989808875334566668234754
Q gi|254780836|r 202 SPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGST 281 (674)
Q Consensus 202 ~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdT 281 (674)
T Consensus 16 ~l~pG~~vLDiGcG~G~~~~~la~~~---g------~~~~v~gvD~s~~~l~~a~~~~~~~~~~v--------~~~~~d~ 78 (241)
T PRK08317 16 AVQPGERVLDVGCGPGNDLRELADRV---G------PEGRVVGIDRSEAMLALARERAAGLLSNV--------EFVRGDA 78 (241)
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHH---C------CCCEEEEEECCHHHHHHHHHHHHHCCCCE--------EEEECCH
T ss_conf 99997999996641749999999974---9------99789999698899999999986228964--------9995546
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 57999866418999816856765310001112344226666535777747706599999999961466578807999738
Q gi|254780836|r 282 LSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLS 361 (674)
Q Consensus 282 L~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~n 361 (674)
T Consensus 79 ~-~lp~~d~sfD~v~~~~~l~--h----------------------~~---d~-~~~l~e~~RvLkP----GG~~vi~d~ 125 (241)
T PRK08317 79 D-GLPFPDESFDAVRSDRVLQ--H----------------------LE---DP-RRALAEMARVLRP----GGRAVVLDT 125 (241)
T ss_pred H-HCCCCCCCCCEEEHHHHHH--H----------------------CC---CH-HHHHHHHHHHCCC----CCEEEEEEC
T ss_conf 4-3589888704562211576--2----------------------25---89-9999999998188----838999966
Q ss_pred --CCCCCCCCCCCCHHHHHHHHHHC---CCEEEEEE--CCCC----CCCCCCCCEEEEEEECCCCCCCCCCEEEEECHHH
Q ss_conf --97134776443268999999884---94688831--7677----6557886169999946887434883899723677
Q gi|254780836|r 362 --SSPLFNGRAGSGESEIRRWLLEN---DLIEAIVA--LPTD----LFFRTNIATYLWILSNRKTEERRGKVQLINATDL 430 (674)
Q Consensus 362 --gs~LF~G~agsGEs~IRk~lie~---d~ieaII~--LP~~----lFynTgI~t~Iwil~k~K~~~rkgkV~lIDAs~~ 430 (674)
T Consensus 126 Dw~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~gr~L~~~l~~aG~~~v~~~~~~~~~~~~~~~~---~~~~l--~~~ 196 (241)
T PRK08317 126 DWDTLVIHSG----DRALMRKILNFWSDHFANPWLGRRLPGLFREAGLTDIEVEPYTLIETDLKEAD---KGFDL--IRI 196 (241)
T ss_pred CCCCCCCCCC----CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCC---HHHHH--HHH
T ss_conf 7886742898----88999999999997478920789999999986990568888778426866353---48799--999
Q ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 6576404664420698999999999972102
Q gi|254780836|r 431 WTSIRNEGKKRRIINDDQRRQILDIYVSREN 461 (674)
Q Consensus 431 ~~~~rk~G~Kr~~l~~~~i~~Iv~~y~~f~e 461 (674)
T Consensus 197 ~~~~~~----~g~~t~~e~~~w~~~l~~~~~ 223 (241)
T PRK08317 197 ARYAVE----AGAISADEADAWLADLAELAR 223 (241)
T ss_pred HHHHHH----CCCCCHHHHHHHHHHHHHHHH
T ss_conf 999998----399999999999999999873