HHsearch alignment for GI: 254780836 and conserved domain: TIGR02081

>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=97.09  E-value=0.0014  Score=42.74  Aligned_cols=73  Identities=25%  Similarity=0.431  Sum_probs=46.1

Q ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             311766540468999999999853100533-32255046666788999999989808875334566668234754579--
Q gi|254780836|r  208 TLYDPTCGTGGFLTDAMNHVADCGSHHKIP-PILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSK--  284 (674)
Q Consensus       208 tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~-~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~--  284 (674)
T Consensus        16 RVLDLGCGdG~LL~~----L~d~k~v~GPPttehRL~G~Eid~~~v~Ac----~~RGv~V----------Iq~D-ld~GL   76 (205)
T TIGR02081        16 RVLDLGCGDGELLAL----LRDEKQVRGPPTTEHRLYGIEIDQDGVLAC----VARGVSV----------IQGD-LDEGL   76 (205)
T ss_pred             EEEEECCCCHHHHHH----HHHHCCCCCCCCCCCEEEEEEECHHHHHHH----HHCCCCE----------ECCC-CCCCC
T ss_conf             364101688789999----997437898887120001023454459999----8625201----------3006-00340


Q ss_pred             CCCCCCEEEEEEECC
Q ss_conf             998664189998168
Q gi|254780836|r  285 DLFTGKRFHYCLSNP  299 (674)
Q Consensus       285 d~~~~~kFD~vlaNP  299 (674)
T Consensus        77 ~~F~D~~FD~ViLsQ   91 (205)
T TIGR02081        77 EAFPDKSFDYVILSQ   91 (205)
T ss_pred             CCCCCCCCCEEEECH
T ss_conf             116788766254213