HHsearch alignment for GI: 254780836 and conserved domain: pfam01555

>pfam01555 N6_N4_Mtase DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.

Probab=96.92  E-value=0.0021  Score=41.62  Aligned_cols=59  Identities=22%  Similarity=0.241  Sum_probs=39.0

Q ss_pred             CCCCCHH--HHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf             7536817--99999999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r  175 EDFMTPR--DVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH  252 (674)
Q Consensus       175 GeffTPR--~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty  252 (674)
T Consensus       160 ~~hpt~kP~~L~~~~I~~~---------s~~g--d~VlDpF~GSGTT~~Aa~~l----~--------R~~iG~E~~~~y~  216 (221)
T pfam01555       160 GAHPTQKPEALLERLILAS---------TNPG--DIVLDPFAGSGTTGAAAKEL----G--------RNFIGIEIEEEYV  216 (221)
T ss_pred             CCCCCCCCHHHHHHHHHHC---------CCCC--CEEEECCCCCHHHHHHHHHH----C--------CEEEEEECCHHHH
T ss_conf             7889989599999999970---------9997--99998999827999999982----9--------9599995899999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780836|r  253 AVCV  256 (674)
Q Consensus       253 aIak  256 (674)
T Consensus       217 ~~a~  220 (221)
T pfam01555       217 EIAK  220 (221)
T ss_pred             HHHH
T ss_conf             9961