HHsearch alignment for GI: 254780836 and conserved domain: pfam03602

Probab=96.97  E-value=0.0025  Score=41.20  Aligned_cols=101  Identities=17%  Similarity=0.106  Sum_probs=61.5

Q ss_pred             CHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             81799999999731784011013877640311766540468999999999853100533322550466667889999999
Q gi|254780836|r  179 TPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAG  258 (674)
Q Consensus       179 TPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~n  258 (674)
T Consensus        24 T~~rvrEalFniL~~~~-------~i~~~~~LDLFaGSGslglEAlSR------GA-----~~v~fvE~~~~a~~~i~~N   85 (181)
T pfam03602        24 TTDRVREALFNILAPYF-------ELGGARVLDLFAGSGALGLEALSR------GA-----SSVVFVEKDKKAVATLKEN   85 (181)
T ss_pred             CCHHHHHHHHHHHCCCC-------CCCCCEEEECCCCCCHHHHHHHHC------CC-----CEEEEEECCHHHHHHHHHH
T ss_conf             84889999997501345-------548987998278726989999976------99-----8899996999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEEEEEECCCCCCC
Q ss_conf             89808875334566668234754--57999866418999816856765
Q gi|254780836|r  259 MLIRRLESDPRRDLSKNIQQGST--LSKDLFTGKRFHYCLSNPPFGKK  304 (674)
Q Consensus       259 Mli~g~~~d~~~~~~~NI~~GdT--L~~d~~~~~kFD~vlaNPPFg~~  304 (674)
T Consensus        86 ~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~fdiIF~DPPY~~~  126 (181)
T pfam03602        86 LEALGLEGA-------VLRMDAARALLRLAGKGPPFDLVFLDPPYAKG  126 (181)
T ss_pred             HHHHCCCCE-------EEECCHHHHHHHHCCCCCCCCEEECCCCCCCH
T ss_conf             998589977-------99810899998753357888766359975420