HHsearch results for GI: 254780836 and protein with PDBid: 1im8_A
>1im8_A YECO; methyltransferase, adenosylhomocysteine, structural genomics, hypothetical protein, structure 2 function project, S2F; HET: SAI; 2.20A {Haemophilus influenzae rd KW20} SCOP: c.66.1.14
Probab=97.33 E-value=0.0047 Score=37.99 Aligned_cols=141 Identities=14% Similarity=0.189 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 44389999999998622766575368179999999973178401101387764031176654046899999999985310
Q gi|254780836|r 154 VMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSH 233 (674)
Q Consensus 154 ~mG~iyE~LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~ 233 (674)
....+|+.+|+|.-- .| +++.+.+..++- ..+ .|+ .+|+|-.||||.++....+++
T Consensus 25 ~va~~fd~~i~r~iP--------~Y--~~~~~~i~~~~~----~~~--~~~--~~vLDlGcGtG~~~~~l~~~~------ 80 (244)
T 1im8_A 25 NVAEVFPDMIQRSVP--------GY--SNIITAIGMLAE----RFV--TAD--SNVYDLGCSRGAATLSARRNI------ 80 (244)
T ss_dssp HHHHHHHHHHHHHST--------TH--HHHHHHHHHHHH----HHC--CTT--CEEEEESCTTCHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHCCC--------CH--HHHHHHHHHHHH----HHC--CCC--CEEEEEEECCCHHHHHHHHHC------
T ss_conf 277760668870599--------88--999999999999----867--997--989992002228899988633------
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 05333225504666678899999998980887533456666823475457999866418999816856765310001112
Q gi|254780836|r 234 HKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVE 313 (674)
Q Consensus 234 ~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~ 313 (674)
. .....++|.|+++....+|+.+.--.+.... -....+|.+. ++...||+++++=-+ .|=
T Consensus 81 -~-~~~~~v~giD~S~~ml~~A~~k~~~~~~~~~------~~~~~~d~~~---~~~~~~d~i~~~~~l--~~~------- 140 (244)
T 1im8_A 81 -N-QPNVKIIGIDNSQPMVERCRQHIAAYHSEIP------VEILCNDIRH---VEIKNASMVILNFTL--QFL------- 140 (244)
T ss_dssp -C-CSSCEEEEECSCHHHHHHHHHHHHTSCCSSC------EEEECSCTTT---CCCCSEEEEEEESCG--GGS-------
T ss_pred -C-CCCCEEEEECCCHHHHHHHHHHHHHCCCCCC------CCCCCCCCCC---CCCCCCCEEEEEEEE--EEC-------
T ss_conf -6-9980899976978999999864431065432------1101232100---012432126886422--305-------
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 3442266665357777477065999999999614665788079997
Q gi|254780836|r 314 KEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIV 359 (674)
Q Consensus 314 ~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV 359 (674)
|+. + -..+++.+-..|+| ||+..+.
T Consensus 141 ---------------~~~-d-~~~~l~~i~~~Lkp----gG~lii~ 165 (244)
T 1im8_A 141 ---------------PPE-D-RIALLTKIYEGLNP----NGVLVLS 165 (244)
T ss_dssp ---------------CGG-G-HHHHHHHHHHHEEE----EEEEEEE
T ss_pred ---------------CHH-H-HHHHHHHHHHHCCC----CCEEEEE
T ss_conf ---------------617-8-89999999851789----9689999