HHsearch results for GI: 254780836 and protein with PDBid: 1o54_A
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomics, JCSG, PSI, protein structure initiative; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.00 E-value=5.9e-05 Score=50.42 Aligned_cols=143 Identities=20% Similarity=0.174 Sum_probs=89.7
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf 65753681799999999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r 173 GAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH 252 (674)
Q Consensus 173 ~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty 252 (674)
-..|---|.++..++..+ +..++.+|+|..||||++.....+.+. + ...++|.|++++..
T Consensus 91 r~~qiiypkD~~~Ii~~l-----------di~pG~~VLDiG~GsG~lt~~lA~~v~---~------~g~V~~~D~~~~~~ 150 (277)
T 1o54_A 91 RRTQIVYPKDSSFIAMML-----------DVKEGDRIIDTGVGSGAMCAVLARAVG---S------SGKVFAYEKREEFA 150 (277)
T ss_dssp C-CCCCCHHHHHHHHHHT-----------TCCTTCEEEEECCTTSHHHHHHHHHTT---T------TCEEEEECCCHHHH
T ss_pred CCCCCCCHHHHHHHHHHH-----------CCCCCCEEEECCCCCHHHHHHHHHHCC---C------CEEEEEEECCHHHH
T ss_conf 886226889999999980-----------899999899768882799999998518---9------80999996889999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99999989808875334566668234754579998664189998168567653100011123442266665357777477
Q gi|254780836|r 253 AVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKIS 332 (674)
Q Consensus 253 aIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~s 332 (674)
.+|+.|+--.|.... -.+..+|-. ..+....||.|+.+.|= .|
T Consensus 151 ~~A~~n~~~~gl~~~------v~~~~~D~~--~~~~~~~~D~V~ld~p~--p~--------------------------- 193 (277)
T 1o54_A 151 KLAESNLTKWGLIER------VTIKVRDIS--EGFDEKDVDALFLDVPD--PW--------------------------- 193 (277)
T ss_dssp HHHHHHHHHTTCGGG------EEEECCCGG--GCCSCCSEEEEEECCSC--GG---------------------------
T ss_pred HHHHHHHHHCCCCCC------EEEEECCCC--CCCCCCCCCEEECCCCC--HH---------------------------
T ss_conf 999998997499876------799968622--44444454102217899--89---------------------------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 06599999999961466578807999738971347764432689999998849468
Q gi|254780836|r 333 DGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIE 388 (674)
Q Consensus 333 dg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ie 388 (674)
.+|.++...||| ||++++..|- ++ + =+++-..|-+.++.+
T Consensus 194 ----~~l~~~~~~LKp----GG~lv~~~P~---i~----Q-v~~~~~~L~~~gF~~ 233 (277)
T 1o54_A 194 ----NYIDKCWEALKG----GGRFATVCPT---TN----Q-VQETLKKLQELPFIR 233 (277)
T ss_dssp ----GTHHHHHHHEEE----EEEEEEEESS---HH----H-HHHHHHHHHHSSEEE
T ss_pred ----HHHHHHHHHCCC----CCEEEEEECC---HH----H-HHHHHHHHHHCCCEE
T ss_conf ----999999973589----9899999597---89----9-999999999879816