HHsearch results for GI: 254780836 and protein with PDBid: 1sqg_A
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.61 E-value=0.0091 Score=36.11 Aligned_cols=166 Identities=12% Similarity=0.152 Sum_probs=90.4
Q ss_pred CCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 36817999999997317840110138776403117665404689999999998531005333225504666678899999
Q gi|254780836|r 177 FMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCV 256 (674)
Q Consensus 177 ffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak 256 (674)
.|+..+....++-.+. .|.+..+|.|-|||-||=-+... +... ...++..|+++.-....+
T Consensus 227 ~~~vQD~aSql~~~~l---------~~~~~~~VLD~CAaPGgKt~~la----~~~~------~~~i~a~d~~~~r~~~l~ 287 (429)
T 1sqg_A 227 WVTVQDASAQGCMTWL---------APQNGEHILDLCAAPGGKTTHIL----EVAP------EAQVVAVDIDEQRLSRVY 287 (429)
T ss_dssp SEEECCHHHHTHHHHH---------CCCTTCEEEEESCTTCHHHHHHH----HHCT------TCEEEEEESSTTTHHHHH
T ss_pred EEEECCHHHHHHHHHC---------CCCCCCEEEEECCCCHHHHHHHH----HHCC------CCCCEEECCHHHHHHHHH
T ss_conf 4773514545677621---------84214414560688048999999----8622------246562234267788887
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC--CCCCHHHHHHHHHCCCCCCCCC---CCCCC
Q ss_conf 998980887533456666823475457999866418999816856765--3100011123442266665357---77747
Q gi|254780836|r 257 AGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK--WEKDKDAVEKEHKNGELGRFGP---GLPKI 331 (674)
Q Consensus 257 ~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~--Wk~~~~~v~~e~~~~~~~Rf~~---glP~~ 331 (674)
.|+-..|..... +...+....+.....+||.||..||-+-. |... ++.||.. .+..-
T Consensus 288 ~~~~r~g~~~~~-------~~~~~~~~~~~~~~~~fD~VLlDaPCSg~G~~rr~-----------Pd~~~~~~~~~l~~l 349 (429)
T 1sqg_A 288 DNLKRLGMKATV-------KQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH-----------PDIKWLRRDRDIPEL 349 (429)
T ss_dssp HHHHHTTCCCEE-------EECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTC-----------TTHHHHCCTTHHHHH
T ss_pred HHHHHCCCCCEE-------ECCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCC-----------HHHHHHCCHHHHHHH
T ss_conf 778641643111-------02344331010354566459970760468443148-----------135331698889999
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 706599999999961466578807999738971347764432689999998849468
Q gi|254780836|r 332 SDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIE 388 (674)
Q Consensus 332 sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ie 388 (674)
..-|..-|.|....++ .||+++-.. -+++.- -+|..|++.|=++.-.+
T Consensus 350 ~~~Q~~iL~~a~~~lk----~gG~LvYsT--CSi~~e---ENe~vV~~fL~~~~~~~ 397 (429)
T 1sqg_A 350 AQLQSEILDAIWPHLK----TGGTLVYAT--CSVLPE---ENSLQIKAFLQRTADAE 397 (429)
T ss_dssp HHHHHHHHHHHGGGEE----EEEEEEEEE--SCCCGG---GTHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHHHHHHCC----CCCEEEEEE--CCCCHH---HCHHHHHHHHHHCCCCE
T ss_conf 9999999999998468----898899997--999846---58999999998589978