HHsearch results for GI: 254780836 and protein with PDBid: 1vl5_A
>1vl5_A Unknown conserved protein BH2331; 10174951, hypothetical protein, structural genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.95A {Bacillus halodurans c-125} SCOP: c.66.1.41
Probab=97.60 E-value=0.00032 Score=45.58 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=75.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 53681799999999731784011013877640311766540468999999999853100533322550466667889999
Q gi|254780836|r 176 DFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVC 255 (674)
Q Consensus 176 effTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIa 255 (674)
.|...+++.+|+-. + .+....+|.|-.||||.++.... + . . -.+.|-|+++..-..|
T Consensus 19 ~h~~~~~~~~l~~~-~----------~l~~~~~VLDiGcG~G~~~~~la----~---~-~----~~v~g~D~s~~~~~~a 75 (260)
T 1vl5_A 19 IHAKGSDLAKLMQI-A----------ALKGNEEVLDVATGGGHVANAFA----P---F-V----KKVVAFDLTEDILKVA 75 (260)
T ss_dssp ----CCCHHHHHHH-H----------TCCSCCEEEEETCTTCHHHHHHG----G---G-S----SEEEEEESCHHHHHHH
T ss_pred HHHCCHHHHHHHHH-C----------CCCCCCEEEEECCCCCHHHHHHH----H---H-C----CEEEEEECCHHHHHHH
T ss_conf 56570999999996-0----------89992999995464719999999----7---2-9----9699998999999986
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 99989808875334566668234754579998664189998168567653100011123442266665357777477065
Q gi|254780836|r 256 VAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGS 335 (674)
Q Consensus 256 k~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~ 335 (674)
+-+.--.|... -.+..||...- .+++..||.|+++== ..|=.+.
T Consensus 76 ~~~~~~~g~~~-------i~~~~~d~~~l-~~~~~sfD~V~~~~~--l~h~~d~-------------------------- 119 (260)
T 1vl5_A 76 RAFIEGNGHQQ-------VEYVQGDAEQM-PFTDERFHIVTCRIA--AHHFPNP-------------------------- 119 (260)
T ss_dssp HHHHHHTTCCS-------EEEEECCC-CC-CSCTTCEEEEEEESC--GGGCSCH--------------------------
T ss_pred HHCCCCCCCCC-------CEEEECCCCCC-CCCCCCEEEEEEECC--HHHCCCH--------------------------
T ss_conf 61222245665-------24775112357-877785579987022--5526899--------------------------
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 9999999996146657880799973
Q gi|254780836|r 336 MLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 336 ~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
-.++.++...||| ||+++|+-
T Consensus 120 ~~~l~~~~r~LkP----gG~l~i~~ 140 (260)
T 1vl5_A 120 ASFVSEAYRVLKK----GGQLLLVD 140 (260)
T ss_dssp HHHHHHHHHHEEE----EEEEEEEE
T ss_pred HHHHHHHHHHCCC----CCEEEEEE
T ss_conf 9999999974285----82899997