HHsearch results for GI: 254780836 and protein with PDBid: 1yb2_A

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=97.88  E-value=9.3e-05  Score=49.12  Aligned_cols=122  Identities=10%  Similarity=0.139  Sum_probs=78.6

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf             75368179999999973178401101387764031176654046899999999985310053332255046666788999
Q gi|254780836|r  175 EDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAV  254 (674)
Q Consensus       175 GeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaI  254 (674)
                      .|--.|.|+..++..+=       +  .|  +.+|+|-.||||++-......+   ++      ...+|+.|++++...+
T Consensus        91 ~qiiypkD~~~Ii~~l~-------i--~P--G~rVLEiG~GsG~lt~~LA~~v---~~------~g~V~~vD~~e~~~~~  150 (275)
T 1yb2_A           91 TQIISEIDASYIIMRCG-------L--RP--GMDILEVGVGSGNMSSYILYAL---NG------KGTLTVVERDEDNLKK  150 (275)
T ss_dssp             ---------------CC-------C--CT--TCEEEEECCTTSHHHHHHHHHH---TT------SSEEEEECSCHHHHHH
T ss_pred             CEECCHHHHHHHHHHCC-------C--CC--CCEEEEECCCCCHHHHHHHHHC---CC------CCEEEEEECCHHHHHH
T ss_conf             60147452999999719-------9--99--7989995771878999999860---89------9589999088999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf             99998980887533456666823475457999866418999816856765310001112344226666535777747706
Q gi|254780836|r  255 CVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDG  334 (674)
Q Consensus       255 ak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg  334 (674)
                      |+-|+--.+...+      -.+..+|-  .+.+++..||.|+.+.|-  .|                             
T Consensus       151 A~~n~~~~~~~~n------V~~~~~Di--~e~~~~~~fD~V~ld~p~--p~-----------------------------  191 (275)
T 1yb2_A          151 AMDNLSEFYDIGN------VRTSRSDI--ADFISDQMYDAVIADIPD--PW-----------------------------  191 (275)
T ss_dssp             HHHHHHTTSCCTT------EEEECSCT--TTCCCSCCEEEEEECCSC--GG-----------------------------
T ss_pred             HHHHHHHHCCCCC------CHHEEHHH--HHCCCCCCCCCEEEECCC--HH-----------------------------
T ss_conf             9986776315675------21110112--210244423305870568--99-----------------------------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             599999999961466578807999738
Q gi|254780836|r  335 SMLFLMHLANKLELPPNGGGRAAIVLS  361 (674)
Q Consensus       335 ~~lFlqh~i~klk~~~~~ggr~aIV~n  361 (674)
                        .++.|+...||+    ||++++..|
T Consensus       192 --~~l~~~~~~LKp----GG~lv~~~P  212 (275)
T 1yb2_A          192 --NHVQKIASMMKP----GSVATFYLP  212 (275)
T ss_dssp             --GSHHHHHHTEEE----EEEEEEEES
T ss_pred             --HHHHHHHHHCCC----CCEEEEEEC
T ss_conf             --999999975688----828999989