HHsearch results for GI: 254780836 and protein with PDBid: 1yb2_A
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum dsm 1728} SCOP: c.66.1.13
Probab=97.88 E-value=9.3e-05 Score=49.12 Aligned_cols=122 Identities=10% Similarity=0.139 Sum_probs=78.6
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf 75368179999999973178401101387764031176654046899999999985310053332255046666788999
Q gi|254780836|r 175 EDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAV 254 (674)
Q Consensus 175 GeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaI 254 (674)
.|--.|.|+..++..+= + .| +.+|+|-.||||++-......+ ++ ...+|+.|++++...+
T Consensus 91 ~qiiypkD~~~Ii~~l~-------i--~P--G~rVLEiG~GsG~lt~~LA~~v---~~------~g~V~~vD~~e~~~~~ 150 (275)
T 1yb2_A 91 TQIISEIDASYIIMRCG-------L--RP--GMDILEVGVGSGNMSSYILYAL---NG------KGTLTVVERDEDNLKK 150 (275)
T ss_dssp ---------------CC-------C--CT--TCEEEEECCTTSHHHHHHHHHH---TT------SSEEEEECSCHHHHHH
T ss_pred CEECCHHHHHHHHHHCC-------C--CC--CCEEEEECCCCCHHHHHHHHHC---CC------CCEEEEEECCHHHHHH
T ss_conf 60147452999999719-------9--99--7989995771878999999860---89------9589999088999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 99998980887533456666823475457999866418999816856765310001112344226666535777747706
Q gi|254780836|r 255 CVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDG 334 (674)
Q Consensus 255 ak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg 334 (674)
|+-|+--.+...+ -.+..+|- .+.+++..||.|+.+.|- .|
T Consensus 151 A~~n~~~~~~~~n------V~~~~~Di--~e~~~~~~fD~V~ld~p~--p~----------------------------- 191 (275)
T 1yb2_A 151 AMDNLSEFYDIGN------VRTSRSDI--ADFISDQMYDAVIADIPD--PW----------------------------- 191 (275)
T ss_dssp HHHHHHTTSCCTT------EEEECSCT--TTCCCSCCEEEEEECCSC--GG-----------------------------
T ss_pred HHHHHHHHCCCCC------CHHEEHHH--HHCCCCCCCCCEEEECCC--HH-----------------------------
T ss_conf 9986776315675------21110112--210244423305870568--99-----------------------------
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 599999999961466578807999738
Q gi|254780836|r 335 SMLFLMHLANKLELPPNGGGRAAIVLS 361 (674)
Q Consensus 335 ~~lFlqh~i~klk~~~~~ggr~aIV~n 361 (674)
.++.|+...||+ ||++++..|
T Consensus 192 --~~l~~~~~~LKp----GG~lv~~~P 212 (275)
T 1yb2_A 192 --NHVQKIASMMKP----GSVATFYLP 212 (275)
T ss_dssp --GSHHHHHHTEEE----EEEEEEEES
T ss_pred --HHHHHHHHHCCC----CCEEEEEEC
T ss_conf --999999975688----828999989