HHsearch results for GI: 254780836 and protein with PDBid: 2as0_A
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.54 E-value=2.5e-07 Score=65.89 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=71.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHH
Q ss_conf 76657536817999999997317840110138776403117665404689999999998531005333225504666678
Q gi|254780836|r 171 SEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPE 250 (674)
Q Consensus 171 ~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ 250 (674)
+...|=|..-|+.-..+.+++ .+| .+|+|.+||||||-+.+... .+ .++.+.|+++.
T Consensus 195 gqktG~flDqr~~R~~~~~~~----------~~g--~~VLDl~~g~G~~si~aa~~------ga-----~~V~~vD~s~~ 251 (396)
T 2as0_A 195 GQKTGFFLDQRENRLALEKWV----------QPG--DRVLDVFTYTGGFAIHAAIA------GA-----DEVIGIDKSPR 251 (396)
T ss_dssp SSSSCCCSTTHHHHHHHGGGC----------CTT--CEEEETTCTTTHHHHHHHHT------TC-----SEEEEEESCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHC----------CCC--CEEEEECCCCCHHHHHHHHC------CC-----CEEEEEECCHH
T ss_conf 541266666788899999751----------589--76988178778889999977------99-----74688718888
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCCCCCCEEEEEEECCCCCC
Q ss_conf 89999999898088753345666682347545---799986641899981685676
Q gi|254780836|r 251 THAVCVAGMLIRRLESDPRRDLSKNIQQGSTL---SKDLFTGKRFHYCLSNPPFGK 303 (674)
Q Consensus 251 tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL---~~d~~~~~kFD~vlaNPPFg~ 303 (674)
....|+-|+-+.|..... .+..+|.+ ......+.+||.|+.|||.-.
T Consensus 252 al~~a~~N~~~Ngl~~~~------~~~~~D~~~~l~~~~~~~~~FD~Ii~DpP~~~ 301 (396)
T 2as0_A 252 AIETAKENAKLNGVEDRM------KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFV 301 (396)
T ss_dssp HHHHHHHHHHHTTCGGGE------EEEESCHHHHHHHHHHTTCCEEEEEECCCCSC
T ss_pred HHHHHHHHHHHCCCCCCC------EEEECCHHHHHHHHHHHCCCCCEEEECCHHHC
T ss_conf 999999999983997455------69966298887888860789987997651211