HHsearch results for GI: 254780836 and protein with PDBid: 2b3t_A
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.15 E-value=3e-10 Score=84.96 Aligned_cols=166 Identities=16% Similarity=0.178 Sum_probs=101.4
Q ss_pred CCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 36817999999997317840110138776403117665404689999999998531005333225504666678899999
Q gi|254780836|r 177 FMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCV 256 (674)
Q Consensus 177 ffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak 256 (674)
-+=||+=..++|+.+... . .....+|.|-|||||-.-+..... .+ ...++|.|++++..++|+
T Consensus 88 vlIPRpeTE~lv~~~l~~----~---~~~~~~ilDlgtGsG~I~i~la~~----~p------~~~v~a~Dis~~Al~~A~ 150 (276)
T 2b3t_A 88 TLIPRPDTECLVEQALAR----L---PEQPCRILDLGTGTGAIALALASE----RP------DCEIIAVDRMPDAVSLAQ 150 (276)
T ss_dssp SCCCCTTHHHHHHHHHHH----S---CSSCCEEEEETCTTSHHHHHHHHH----CT------TSEEEEECSSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH----C---CCCCCEEEEECCCCHHHHHHHHHH----CC------CCEEEEECCCHHHHHHHH
T ss_conf 706997699999999875----1---457861764146532999999986----89------875886417668899999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC--CCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 99898088753345666682347545799986641899981685676--5310001112344226666535777747706
Q gi|254780836|r 257 AGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGK--KWEKDKDAVEKEHKNGELGRFGPGLPKISDG 334 (674)
Q Consensus 257 ~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~--~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg 334 (674)
-|.-.+|... -++..||-+.. ..+.+||+|+|||||=. +|+.....++.|... .+-...||
T Consensus 151 ~Na~~~~~~~-------v~~~~~D~~~~--~~~~~fDlIvsNPPYi~~~~~~~~~~~v~~EP~~--------AL~gg~dG 213 (276)
T 2b3t_A 151 RNAQHLAIKN-------IHILQSDWFSA--LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLT--------ALVAADSG 213 (276)
T ss_dssp HHHHHHTCCS-------EEEECCSTTGG--GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCST--------TTBCHHHH
T ss_pred HHHHHCCCCC-------EEEEECCCCCC--CCCCCEEEEEECCCCCCHHHHHCCCCCCCCCHHH--------HHHCCCCH
T ss_conf 9999749987-------79997576433--6788415788569867713454077521233788--------86178647
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 5999999999614665788079997389713477644326899999988494
Q gi|254780836|r 335 SMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDL 386 (674)
Q Consensus 335 ~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ 386 (674)
+.|+.+++.......+.||.+.+.+.. .+ ...+++.+.++++
T Consensus 214 -l~~~~~ii~~a~~~L~~~G~l~lEig~--------~q-~~~v~~~~~~~gf 255 (276)
T 2b3t_A 214 -MADIVHIIEQSRNALVSGGFLLLEHGW--------QQ-GEAVRQAFILAGY 255 (276)
T ss_dssp -THHHHHHHHHHGGGEEEEEEEEEECCS--------SC-HHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHCCCCCEEEEEECC--------HH-HHHHHHHHHHCCC
T ss_conf -899999999999851679889999890--------69-9999999997799