HHsearch results for GI: 254780836 and protein with PDBid: 2i62_A
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A*
Probab=95.90 E-value=0.084 Score=29.82 Aligned_cols=174 Identities=16% Similarity=0.029 Sum_probs=80.5
Q ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC----------C
Q ss_conf 877640311766540468999999999853100533322550466667889999999898088753345----------6
Q gi|254780836|r 202 SPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRR----------D 271 (674)
Q Consensus 202 ~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~----------~ 271 (674)
.+-++.+|.|-.||||.+...+ ... ....++|.++++.....|+.+.--.+...+... .
T Consensus 53 ~~~~g~~vLDlGCG~G~~~~~l-------~~~----~~~~V~giD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLS-------ACE----SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGN 121 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTT-------GGG----TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCCCHHHHHH-------HHH----CCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf 8888988999678776769999-------972----19989995699999999999987547762213257788752144
Q ss_pred C-------------CCCCCCCCCCCC---CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 6-------------668234754579---998664189998168567653100011123442266665357777477065
Q gi|254780836|r 272 L-------------SKNIQQGSTLSK---DLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGS 335 (674)
Q Consensus 272 ~-------------~~NI~~GdTL~~---d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~ 335 (674)
. .......+.+.. ......+||.|+++=-. .|-. +...+ -
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~fD~i~~~~~l--~~~~---------------------~~~~~-~ 177 (265)
T 2i62_A 122 RMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCL--DAAC---------------------PDLPA-Y 177 (265)
T ss_dssp CSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH--HHHC---------------------SSHHH-H
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCE--EECC---------------------CCHHH-H
T ss_conf 0156777777777764320210004443455567864799853722--3057---------------------65888-9
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEE--CCCCCCCCCCCC-----CCHHHHHHHHHHCCCE-EE--EEECCCCCCCCCCCCE
Q ss_conf 999999999614665788079997--389713477644-----3268999999884946-88--8317677655788616
Q gi|254780836|r 336 MLFLMHLANKLELPPNGGGRAAIV--LSSSPLFNGRAG-----SGESEIRRWLLENDLI-EA--IVALPTDLFFRTNIAT 405 (674)
Q Consensus 336 ~lFlqh~i~klk~~~~~ggr~aIV--~ngs~LF~G~ag-----sGEs~IRk~lie~d~i-ea--II~LP~~lFynTgI~t 405 (674)
..++.++...||| ||+.... .+.+-...|+.- =.+..||..|-+.++. +. ++..+......-. +
T Consensus 178 ~~~~~~~~~~Lkp----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~aGf~v~~~~~~~~~~~~~~~~~--~ 251 (265)
T 2i62_A 178 RTALRNLGSLLKP----GGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNN--E 251 (265)
T ss_dssp HHHHHHHHTTEEE----EEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCC--C
T ss_pred HHHHHHHHHHCCC----CEEEEEEEECCCCCCEECCEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC--C
T ss_conf 9999999985488----809999998578854346555267387999999999987998999998347720222688--6
Q ss_pred EEEEEECCCCC
Q ss_conf 99999468874
Q gi|254780836|r 406 YLWILSNRKTE 416 (674)
Q Consensus 406 ~Iwil~k~K~~ 416 (674)
.+.++.-+||.
T Consensus 252 ~~~~lvArKp~ 262 (265)
T 2i62_A 252 GLFSLVGRKPG 262 (265)
T ss_dssp CEEEEEEECCC
T ss_pred EEEEEEEECCC
T ss_conf 28999997878