HHsearch results for GI: 254780836 and protein with PDBid: 2ih2_A
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=100.00 E-value=2.4e-38 Score=268.35 Aligned_cols=208 Identities=17% Similarity=0.170 Sum_probs=155.3
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 99999986227665753681799999999731784011013877640311766540468999999999853100533322
Q gi|254780836|r 161 HLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPIL 240 (674)
Q Consensus 161 ~LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~ 240 (674)
-+++..+....++-|+||||.+|+++|++++. +....+|+|||||||+||+.+.+++.. ..
T Consensus 5 ~~~~~~s~~~~k~~G~~yTP~~i~~~~~~~l~----------~~~~~~IlDPacGsG~FL~~~~~~~~~---------~~ 65 (421)
T 2ih2_A 5 PLLSLPSNSAPRSLGRVETPPEVVDFMVSLAE----------APRGGRVLEPACAHGPFLRAFREAHGT---------AY 65 (421)
T ss_dssp ----------------CCCCHHHHHHHHHHCC----------CCTTCEEEEETCTTCHHHHHHHHHHCS---------CS
T ss_pred HHHHHHHHHCCCCCCEECCCHHHHHHHHHHCC----------CCCCCEEEECCCCHHHHHHHHHHHCCC---------CC
T ss_conf 66421100133429878891999999999478----------999699996877646999999986776---------78
Q ss_pred EEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH-HHHCC
Q ss_conf 55046666788999999989808875334566668234754579998664189998168567653100011123-44226
Q gi|254780836|r 241 VPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEK-EHKNG 319 (674)
Q Consensus 241 ~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~-e~~~~ 319 (674)
++||+|+++.++++|+++ +|..||+|..+. ..+||+|++||||+............ .....
T Consensus 66 ~i~G~did~~~~~la~~~----------------~i~~~D~l~~~~--~~~fD~VigNPPy~~~~~~~~~~~~~~~~~~~ 127 (421)
T 2ih2_A 66 RFVGVEIDPKALDLPPWA----------------EGILADFLLWEP--GEAFDLILGNPPYGIVGEASKYPIHVFKAVKD 127 (421)
T ss_dssp EEEEEESCTTTCCCCTTE----------------EEEESCGGGCCC--SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHH
T ss_pred EEEEEECCHHHHHHHHHH----------------HHHHCCCCCCCC--CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 699997989999999974----------------277377333685--45777787257655445455442123333222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 66653577774770659999999996146657880799973897134776443268999999884946888317677655
Q gi|254780836|r 320 ELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDLFF 399 (674)
Q Consensus 320 ~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ieaII~LP~~lFy 399 (674)
...+.........|-..+|++++++.|++ ||++|+|+|.|.|+... ...+|++|++++.+ +|.+|.++|.
T Consensus 128 ~~~~~~~~~~~~~dl~~~Fi~~~l~~lk~----~G~~~~I~P~s~l~~~~----~~~lR~~L~~~~~i--~i~~~~~~F~ 197 (421)
T 2ih2_A 128 LYKKAFSTWKGKYNLYGAFLEKAVRLLKP----GGVLVFVVPATWLVLED----FALLREFLAREGKT--SVYYLGEVFP 197 (421)
T ss_dssp HHHHHCTTCCTTCCHHHHHHHHHHHHEEE----EEEEEEEEEGGGGTCGG----GHHHHHHHHHHSEE--EEEEEESCST
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCCEEEEECCCCCCCCC----HHHHHHHHHHCCCE--EEECCCCCCC
T ss_conf 22013567899653999999999996377----88189990673112641----39999999963979--9984731135
Q ss_pred CCCCCEEEEEEECCCC
Q ss_conf 7886169999946887
Q gi|254780836|r 400 RTNIATYLWILSNRKT 415 (674)
Q Consensus 400 nTgI~t~Iwil~k~K~ 415 (674)
+|+++|||++++|+++
T Consensus 198 ~a~v~t~Il~l~K~~~ 213 (421)
T 2ih2_A 198 QKKVSAVVIRFQKSGK 213 (421)
T ss_dssp TCCCCEEEEEEESSSC
T ss_pred CCCCCEEEEEEECCCC
T ss_conf 7887469999982798