HHsearch results for GI: 254780836 and protein with PDBid: 2kw5_A
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=94.78 E-value=0.2 Score=27.30 Aligned_cols=155 Identities=11% Similarity=-0.003 Sum_probs=81.5
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31176654046899999999985310053332255046666788999999989808875334566668234754579998
Q gi|254780836|r 208 TLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLF 287 (674)
Q Consensus 208 tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~ 287 (674)
+|.|..||||..... +.+. ...++|.|+++...+.|+.+.--.|.+.. +..+|-. +-.+
T Consensus 32 ~vLDlGcG~G~~~~~----la~~--------G~~V~~vD~s~~~l~~a~~~~~~~~~~~~--------~~~~d~~-~~~~ 90 (202)
T 2kw5_A 32 KILCLAEGEGRNACF----LASL--------GYEVTAVDQSSVGLAKAKQLAQEKGVKIT--------TVQSNLA-DFDI 90 (202)
T ss_dssp EEEECCCSCTHHHHH----HHTT--------TCEEEEECSSHHHHHHHHHHHHHHTCCEE--------EECCBTT-TBSC
T ss_pred CEEEECCCCCHHHHH----HHHC--------CCCEEEEECCHHHHHHHHHHHHHHCCCEE--------EEECCHH-HCCC
T ss_conf 399983778999999----9986--------99146777789999999998887199558--------9982263-3899
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC--CCCC
Q ss_conf 66418999816856765310001112344226666535777747706599999999961466578807999738--9713
Q gi|254780836|r 288 TGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLS--SSPL 365 (674)
Q Consensus 288 ~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~n--gs~L 365 (674)
+...||.+++.-.+- |+. + .-.++..+...|+| ||.+.+... ...-
T Consensus 91 ~~~~~d~~~~~~~~~--------------------------~~~-~-~~~~l~~~~~~Lkp----gG~~~~~~~~~~~~~ 138 (202)
T 2kw5_A 91 VADAWEGIVSIFCHL--------------------------PSS-L-RQQLYPKVYQGLKP----GGVFILEGFAPEQLQ 138 (202)
T ss_dssp CTTTCSEEEEECCCC--------------------------CHH-H-HHHHHHHHHTTCCS----SEEEEEEEECTTTGG
T ss_pred CCCCEEEEEEEEEEC--------------------------CHH-H-HHHHHHHHHHHCCC----CCEEEEEECCCCCCC
T ss_conf 889599985157853--------------------------788-9-99999999998197----949999981677644
Q ss_pred C-CCCCC-----CCHHHHHHHHHHCCCE--EEE-EECCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 4-77644-----3268999999884946--888-317677655788616999994688743
Q gi|254780836|r 366 F-NGRAG-----SGESEIRRWLLENDLI--EAI-VALPTDLFFRTNIATYLWILSNRKTEE 417 (674)
Q Consensus 366 F-~G~ag-----sGEs~IRk~lie~d~i--eaI-I~LP~~lFynTgI~t~Iwil~k~K~~~ 417 (674)
+ .|+.. -.+.++|+.+-.-++. +.. ..+++.. +.+|.+..|.++- +|+++
T Consensus 139 ~~~g~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~eg~-~h~g~a~vi~lva-rK~e~ 197 (202)
T 2kw5_A 139 YNTGGPKDLDLLPKLETLQSELPSLNWLIANNLERNLDEGA-YHQGKAALIQLLG-QKLEH 197 (202)
T ss_dssp GTSCCSSSGGGCCCHHHHHHHCSSSCEEEEEEEEEECSCSS-SSCCEEEEEEEEE-CCCSS
T ss_pred CCCCCCCCHHHCCCHHHHHHHCCCCCEEEEEEEEEEECCCC-CCCCCHHHEEEEE-EEECC
T ss_conf 56799999477899899998656682699999999704688-7777565289999-92555