HHsearch results for GI: 254780836 and protein with PDBid: 2nxc_A
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransferase posttranslational modification; 1.59A {Thermus thermophilus HB8} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.01 E-value=7.5e-06 Score=56.25 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=88.7
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf 57536817999999997317840110138776403117665404689999999998531005333225504666678899
Q gi|254780836|r 174 AEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHA 253 (674)
Q Consensus 174 aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tya 253 (674)
-|.|-|-|-.+++|.+.+ .|| .+|.|..||||-+.+.+.+ . + ..++|.|+++....
T Consensus 101 TG~H~TT~l~l~~l~~~~----------~~g--~~VLDvGcGsGiLsi~aak----~----G----~~V~aiDid~~av~ 156 (254)
T 2nxc_A 101 TGHHETTRLALKALARHL----------RPG--DKVLDLGTGSGVLAIAAEK----L----G----GKALGVDIDPMVLP 156 (254)
T ss_dssp -CCSHHHHHHHHHHHHHC----------CTT--CEEEEETCTTSHHHHHHHH----T----T----CEEEEEESCGGGHH
T ss_pred CCCCHHHHHHHHHHHHHC----------CCC--CEEEEECCCCCHHHHHHHH----C----C----CEEEEEECCHHHHH
T ss_conf 999889999999998417----------997--9899971777888999984----5----9----98999988727889
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 99999898088753345666682347545799986641899981685676531000111234422666653577774770
Q gi|254780836|r 254 VCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISD 333 (674)
Q Consensus 254 Iak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sd 333 (674)
.|+.|.-..|++. .+..||... ..+..+||+|++|-.+.. +
T Consensus 157 ~a~~N~~~N~v~~--------~~~~~~~~~--~~~~~~fDlIvaNi~~~~--------l--------------------- 197 (254)
T 2nxc_A 157 QAEANAKRNGVRP--------RFLEGSLEA--ALPFGPFDLLVANLYAEL--------H--------------------- 197 (254)
T ss_dssp HHHHHHHHTTCCC--------EEEESCHHH--HGGGCCEEEEEEECCHHH--------H---------------------
T ss_pred HHHHHHHHHCCCE--------EEEECCHHH--CCCCCCCCEEEEEEEHHH--------H---------------------
T ss_conf 9999899709944--------999874345--164578668999810065--------6---------------------
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 65999999999614665788079997389713477644326899999988494
Q gi|254780836|r 334 GSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDL 386 (674)
Q Consensus 334 g~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ 386 (674)
..++.++...|+| ||+.. +.| .| . +-+..|++.+-+.++
T Consensus 198 --~~l~~~l~~~Lkp----gG~Li--lSG-il-~----~~~~~i~~~~~~~g~ 236 (254)
T 2nxc_A 198 --AALAPRYREALVP----GGRAL--LTG-IL-K----DRAPLVREAMAGAGF 236 (254)
T ss_dssp --HHHHHHHHHHEEE----EEEEE--EEE-EE-G----GGHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHCCC----CCEEE--EEE-CC-H----HHHHHHHHHHHHCCC
T ss_conf --8899999985688----85999--995-74-5----209999999998899