HHsearch results for GI: 254780836 and protein with PDBid: 2vdv_E

>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=94.60  E-value=0.15  Score=28.18  Aligned_cols=121  Identities=18%  Similarity=0.208  Sum_probs=69.1

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCC--
Q ss_conf             0311766540468999999999853100533322550466667889999999898088753345666682--347545--
Q gi|254780836|r  207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNI--QQGSTL--  282 (674)
Q Consensus       207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI--~~GdTL--  282 (674)
                      .+|.|-.||+|++|+..+.    .++      ...+.|.|+.....+-+...++-.+.... ...+..||  ..||..  
T Consensus        51 p~iLeIGcG~G~~l~~lA~----~~p------~~~~iGiEi~~~~v~~~~~ri~~~~~~~a-~~~~l~Ni~~~~~da~~~  119 (246)
T 2vdv_E           51 VTIADIGCGFGGLMIDLSP----AFP------EDLILGMEIRVQVTNYVEDRIIALRNNTA-SKHGFQNINVLRGNAMKF  119 (246)
T ss_dssp             EEEEEETCTTSHHHHHHHH----HST------TSEEEEEESCHHHHHHHHHHHHHHHHTC--CCSTTTTEEEEECCTTSC
T ss_pred             CEEEEECCCCCHHHHHHHH----HCC------CCCEEEEECCHHHHHHHHHHHHHHHHHHH-HHCCCCEEEEEECCHHHH
T ss_conf             8799982689989999998----689------87589885036899999999999987478-774987199993734888


Q ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf             79998664189998168567653100011123442266665357777477065999999999614665788079997389
Q gi|254780836|r  283 SKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSS  362 (674)
Q Consensus       283 ~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ng  362 (674)
                      -.+.++...+|.|..|-|  -+|-+.      .+.   ..|.-      +   --||..+...|++    ||++-++...
T Consensus       120 l~~~~~~~s~d~v~i~FP--DPw~K~------rh~---krRli------~---~~fl~~~~~~Lkp----gG~l~~~TD~  175 (246)
T 2vdv_E          120 LPNFFEKGQLSKMFFCFP--DPHFKQ------RKH---KARII------T---NTLLSEYAYVLKE----GGVVYTITDV  175 (246)
T ss_dssp             GGGTSCTTCEEEEEEESC--CCC---------------CSSCC------C---HHHHHHHHHHEEE----EEEEEEEESC
T ss_pred             HHHHCCCCCCCEEEEECC--CCCCCC------CCH---HHHHC------C---HHHHHHHHHHHCC----CCEEEEEECC
T ss_conf             887514677673489889--887731------101---13432------4---7789999997066----9899999799