HHsearch results for GI: 254780836 and protein with PDBid: 3bt7_A
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.53 E-value=0.00092 Score=42.60 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=87.8
Q ss_pred CCCCCCH-HHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf 5753681-799999999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r 174 AEDFMTP-RDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH 252 (674)
Q Consensus 174 aGeffTP-R~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty 252 (674)
.+-||=+ +.+...|++.+. +.+...+ ..|.|-+||+|.|=.. +.+.. ..++|.|+|+.+.
T Consensus 188 p~sFfQ~N~~~~~~l~~~v~----~~~~~~~---~~vlDLycG~Gt~sl~-------La~~~-----~~V~gvE~~~~av 248 (369)
T 3bt7_A 188 ENSFTQPNAAMNIQMLEWAL----DVTKGSK---GDLLELYCGNGNFSLA-------LARNF-----DRVLATEIAKPSV 248 (369)
T ss_dssp TTSCCCSBHHHHHHHHHHHH----HHTTTCC---SEEEEESCTTSHHHHH-------HGGGS-----SEEEEECCCHHHH
T ss_pred CCCEECCCHHHHHHHHHHHH----HHHCCCC---CEEEECCCCCCHHHHH-------HHHCC-----CEEEEEEECHHHH
T ss_conf 99770559899999999999----8715677---6488737896588999-------87308-----5788999702678
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCC------CCC---------CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999989808875334566668234754------579---------998664189998168567653100011123442
Q gi|254780836|r 253 AVCVAGMLIRRLESDPRRDLSKNIQQGST------LSK---------DLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHK 317 (674)
Q Consensus 253 aIak~nMli~g~~~d~~~~~~~NI~~GdT------L~~---------d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~ 317 (674)
+-|+.|..+.|++.-. ...||. ++. -.....++|.|+.+||=
T Consensus 249 ~~A~~Na~~n~i~N~~-------f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR---------------- 305 (369)
T 3bt7_A 249 AAAQYNIAANHIDNVQ-------IIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPR---------------- 305 (369)
T ss_dssp HHHHHHHHHTTCCSEE-------EECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT----------------
T ss_pred HHHHHHHHHCCCCCEE-------EEECCHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCCC----------------
T ss_conf 9999999975988718-------99725999998876314566530231012658779989796----------------
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC-CCCCCCCCCCCCCHHHHHHHHHHCCC-EEEEEECCC
Q ss_conf 2666653577774770659999999996146657880799973-89713477644326899999988494-688831767
Q gi|254780836|r 318 NGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL-SSSPLFNGRAGSGESEIRRWLLENDL-IEAIVALPT 395 (674)
Q Consensus 318 ~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~-ngs~LF~G~agsGEs~IRk~lie~d~-ieaII~LP~ 395 (674)
-|. - . .+.-++++ . -|+.-|- |-++|- ..+. +| .++| |+.|. |=
T Consensus 306 ------~Gl--~----~---~v~~~~~~--~-----~~ivYVSCnP~Tla--------rDl~-~L-~~gy~l~~~~--~~ 351 (369)
T 3bt7_A 306 ------SGL--D----S---ETEKMVQA--Y-----PRILYISCNPETLC--------KNLE-TL-SQTHKVERLA--LF 351 (369)
T ss_dssp ------TCC--C----H---HHHHHHTT--S-----SEEEEEESCHHHHH--------HHHH-HH-HHHEEEEEEE--EE
T ss_pred ------CCC--H----H---HHHHHHHC--C-----CCEEEEECCHHHHH--------HHHH-HH-HCCCEEEEEE--EE
T ss_conf ------251--8----9---99999856--9-----95999908989999--------9999-98-5485687999--97
Q ss_pred CCCCCCCCCEEEEEEEC
Q ss_conf 76557886169999946
Q gi|254780836|r 396 DLFFRTNIATYLWILSN 412 (674)
Q Consensus 396 ~lFynTgI~t~Iwil~k 412 (674)
+||-.|.===+|-+|.+
T Consensus 352 D~FP~T~HvE~v~~l~r 368 (369)
T 3bt7_A 352 DQFPYTHHMQCGVLLTA 368 (369)
T ss_dssp CCSTTSSCCEEEEEEEE
T ss_pred ECCCCCCEEEEEEEEEC
T ss_conf 12899980888999963