HHsearch results for GI: 254780836 and protein with PDBid: 3dlc_A
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; NP_988299.1, structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.58 E-value=0.00098 Score=42.44 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=67.4
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31176654046899999999985310053332255046666788999999989808875334566668234754579998
Q gi|254780836|r 208 TLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLF 287 (674)
Q Consensus 208 tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~ 287 (674)
+|+|-.||+|.++....++ ....++|.|+++.....|+.+.--.|.... -+...+|-..- .+
T Consensus 46 ~VLDiGcG~G~~~~~la~~-----------~~~~v~giD~s~~~l~~a~~~~~~~~~~~~------i~~~~~d~~~~-~~ 107 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-----------SDFSIRALDFSKHMNEIALKNIADANLNDR------IQIVQGDVHNI-PI 107 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-----------SEEEEEEEESCHHHHHHHHHHHHHTTCTTT------EEEEECBTTBC-SS
T ss_pred EEEEECCCCCHHHHHHHHH-----------CCCEEEEEECCHHHHHHHHHHHHHCCCCCC------EEECCCCCCCC-CC
T ss_conf 3999627585999999953-----------699899997978999999874442166664------00013653356-75
Q ss_pred CCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 6641899981685676531000111234422666653577774770659999999996146657880799973
Q gi|254780836|r 288 TGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 288 ~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
++..||+|+++-.+- |-.+ - -.+++.+...||| ||++.|.-
T Consensus 108 ~~~~fD~V~~~~~l~--h~~d-------------------------~-~~~l~~~~r~Lkp----gG~l~i~~ 148 (219)
T 3dlc_A 108 EDNYADLIVSRGSVF--FWED-------------------------V-ATAFREIYRILKS----GGKTYIGG 148 (219)
T ss_dssp CTTCEEEEEEESCGG--GCSC-------------------------H-HHHHHHHHHHEEE----EEEEEEEE
T ss_pred CCCCCCEEEECCHHH--HCCC-------------------------H-HHHHHHHHHHCCC----CCEEEEEE
T ss_conf 445552999844167--4589-------------------------9-9999999998580----83899996