HHsearch results for GI: 254780836 and protein with PDBid: 3dp7_A
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research, nysgxrc; 2.33A {Bacteroides vulgatus atcc 8482}
Probab=92.53 E-value=0.5 Score=24.74 Aligned_cols=155 Identities=11% Similarity=0.112 Sum_probs=77.6
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 03117665404689999999998531005333225504666678899999998980887533456666823475457999
Q gi|254780836|r 207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDL 286 (674)
Q Consensus 207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~ 286 (674)
.+|.|-.||+|..+....+ .++. ..+-++++ +....+++.+.--.+.... -....||-+..+.
T Consensus 181 ~~vLDiG~G~G~~~~~la~----~~p~------~~~~~~d~-~~~~~~~~~~~~~~~~~~r------v~~~~~d~~~~~~ 243 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQ----YNKE------VEVTIVDL-PQQLEMMRKQTAGLSGSER------IHGHGANLLDRDV 243 (363)
T ss_dssp SEEEEESCTTCHHHHHHHH----HSTT------CEEEEEEC-HHHHHHHHHHHTTCTTGGG------EEEEECCCCSSSC
T ss_pred CEEEEECCCCHHHHHHHHH----HCCC------EEEEEECC-CHHHHHHHHHHHHCCCCCC------EEEEECCCCCCCC
T ss_conf 9899979995299999998----6897------39999757-1167999988765278772------6999733335667
Q ss_pred CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC---CCC
Q ss_conf 86641899981685676531000111234422666653577774770659999999996146657880799973---897
Q gi|254780836|r 287 FTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL---SSS 363 (674)
Q Consensus 287 ~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~---ngs 363 (674)
.....||+++..--+. .|..+. -..+++++...|+| ||++.|+- +..
T Consensus 244 ~~~~~~d~~~~~~~l~-~~~~~~-------------------------~~~iL~~i~~~L~p----gG~lli~d~~~~~~ 293 (363)
T 3dp7_A 244 PFPTGFDAVWMSQFLD-CFSEEE-------------------------VISILTRVAQSIGK----DSKVYIMETLWDRQ 293 (363)
T ss_dssp CCCCCCSEEEEESCST-TSCHHH-------------------------HHHHHHHHHHHCCT----TCEEEEEECCTTSC
T ss_pred CCCCCCEEEEEECHHH-CCCHHH-------------------------HHHHHHHHHHHCCC----CCEEEEEEECCCCC
T ss_conf 8999844897710120-256144-------------------------54579999966888----82899998315898
Q ss_pred C-----------------CCCCCCC-CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
Q ss_conf 1-----------------3477644-3268999999884946888317677655788616999994688
Q gi|254780836|r 364 P-----------------LFNGRAG-SGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRK 414 (674)
Q Consensus 364 ~-----------------LF~G~ag-sGEs~IRk~lie~d~ieaII~LP~~lFynTgI~t~Iwil~k~K 414 (674)
+ +..|+.. -.+.+++++|-+.++ .|+.. ..++|...+|+...++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~aGF--~v~~~----~~~~~~~~~~l~~r~k~ 356 (363)
T 3dp7_A 294 RYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL--EVEEI----QDNIGLGHSILQCRLKE 356 (363)
T ss_dssp SSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE--EESCC----CCCBTTTBEEEEEEEC-
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC--EEEEE----EECCCCCEEEEEEEECC
T ss_conf 87624689999889999862589877899999999997799--79999----94699980899999877