HHsearch results for GI: 254780836 and protein with PDBid: 3eey_A
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics, protein structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.22 E-value=8.2e-05 Score=49.48 Aligned_cols=116 Identities=15% Similarity=0.090 Sum_probs=74.4
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40311766540468999999999853100533322550466667889999999898088753345666682347545799
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKD 285 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d 285 (674)
+.+|.|-+||||++.....+++. ....++|.|+++....+|+.|.-..|..... .+..+|.-.-+
T Consensus 23 G~~VLDlGcG~G~~t~~la~~~~---------~~~~V~giDis~~~l~~ar~~~~~~g~~~~v------~~~~~d~~~~~ 87 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVG---------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRV------TLIKDGHQNMD 87 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHC---------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGE------EEECSCGGGGG
T ss_pred CCEEEEEEEECCHHHHHHHHHHC---------CCEEEEEEECCHHHHHHHHHHHHHCCCCCCE------EEEECCHHHHH
T ss_conf 99999992048899999999838---------9819999973889989999999983998778------99985867601
Q ss_pred CCCCCEEEEEEECCCCCCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 9866418999816856765-31000111234422666653577774770659999999996146657880799973
Q gi|254780836|r 286 LFTGKRFHYCLSNPPFGKK-WEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 286 ~~~~~kFD~vlaNPPFg~~-Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
.+....+|.+..++||-.. ++.. .....-...+++.+...|++ ||+++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~~~lkp----gG~l~~~~ 139 (197)
T 3eey_A 88 KYIDCPVKAVMFNLGYLPSGDHSI--------------------STRPETTIQALSKAMELLVT----GGIITVVI 139 (197)
T ss_dssp GTCCSCEEEEEEEESBCTTSCTTC--------------------BCCHHHHHHHHHHHHHHEEE----EEEEEEEE
T ss_pred HCCCCCCCEEEEEEEECCCCCHHH--------------------CCCHHHHHHHHHHHHHHHCC----CCEEEEEE
T ss_conf 215776430465255325440220--------------------16857799999999997289----97899999