HHsearch results for GI: 254780836 and protein with PDBid: 3f4k_A
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.0039 Score=38.53 Aligned_cols=121 Identities=15% Similarity=0.048 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 79999999973178401101387764031176654046899999999985310053332255046666788999999989
Q gi|254780836|r 181 RDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGML 260 (674)
Q Consensus 181 R~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMl 260 (674)
++.++-++.+|- .+ ++ ..+|+|-+||||.+.....++ . ...++|.|+++..-++|+.++.
T Consensus 31 ~~~~~~~l~~l~-----~l---~~-~~rVLDlGCG~G~~~~~La~~-------~----~~~v~gvD~S~~ml~~a~~~~~ 90 (257)
T 3f4k_A 31 PEATRKAVSFIN-----EL---TD-DAKIADIGCGTGGQTLFLADY-------V----KGQITGIDLFPDFIEIFNENAV 90 (257)
T ss_dssp HHHHHHHHTTSC-----CC---CT-TCEEEEETCTTSHHHHHHHHH-------C----CSEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC-----CC---CC-CCEEEEECCCCCHHHHHHHHH-------C----CCEEEEEECCHHHHHHHHHHHH
T ss_conf 999999998360-----79---99-797999717797999999986-------6----9979999684567788898776
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 80887533456666823475457999866418999816856765310001112344226666535777747706599999
Q gi|254780836|r 261 IRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLM 340 (674)
Q Consensus 261 i~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlq 340 (674)
-.|.... -.+..||... -.|++..||+|++.= ...|- + +. .++.
T Consensus 91 ~~~~~~~------v~~~~~d~~~-l~~~~~~fD~V~~~~--~l~~~----------------------~---~~--~~l~ 134 (257)
T 3f4k_A 91 KANCADR------VKGITGSMDN-LPFQNEELDLIWSEG--AIYNI----------------------G---FE--RGMN 134 (257)
T ss_dssp HTTCTTT------EEEEECCTTS-CSSCTTCEEEEEEES--CSCCC----------------------C---HH--HHHH
T ss_pred HHHHHCC------HHHHHHHHHH-HHCCCCCCCEEEEHH--HHHHC----------------------C---HH--HHHH
T ss_conf 4321000------0111303887-623688521898605--47728----------------------9---89--9999
Q ss_pred HHHHHHCCCCCCCCEEEEECC
Q ss_conf 999961466578807999738
Q gi|254780836|r 341 HLANKLELPPNGGGRAAIVLS 361 (674)
Q Consensus 341 h~i~klk~~~~~ggr~aIV~n 361 (674)
.+...||| ||++++..+
T Consensus 135 e~~rvLkp----gG~l~i~~~ 151 (257)
T 3f4k_A 135 EWSKYLKK----GGFIAVSEA 151 (257)
T ss_dssp HHHTTEEE----EEEEEEEEE
T ss_pred HHHHHCCC----CEEEEEEEC
T ss_conf 99997085----819999988