HHsearch results for GI: 254780836 and protein with PDBid: 3frh_A
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.24 E-value=0.008 Score=36.46 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=49.2
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 03117665404689999999998531005333225504666678899999998980887533456666823475457999
Q gi|254780836|r 207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDL 286 (674)
Q Consensus 207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~ 286 (674)
.+|.|-.||+|.+... ..+ ...++|.++++..-.+|+.+.-..|... ....+|.+..+
T Consensus 107 ~~VLDlGCG~G~l~~~-------~~~------~~~v~gvD~s~~~l~~ar~~~~~~~~~~--------~~~~~d~~~~~- 164 (253)
T 3frh_A 107 RRVLDIACGLNPLALY-------ERG------IASVWGCDIHQGLGDVITPFAREKDWDF--------TFALQDVLCAP- 164 (253)
T ss_dssp SEEEEETCTTTHHHHH-------HTT------CSEEEEEESBHHHHHHHHHHHHHTTCEE--------EEEECCTTTSC-
T ss_pred CEEEEECCCCCHHHHH-------HCC------CCEEEEEECCHHHHHHHHHHHHHCCCCC--------EEEECCHHHCC-
T ss_conf 8599967888899999-------768------9838999797999999999999829970--------48855622245-
Q ss_pred CCCCEEEEEEECC
Q ss_conf 8664189998168
Q gi|254780836|r 287 FTGKRFHYCLSNP 299 (674)
Q Consensus 287 ~~~~kFD~vlaNP 299 (674)
....||+|++.-
T Consensus 165 -~~~~~D~v~~~~ 176 (253)
T 3frh_A 165 -PAEAGDLALIFK 176 (253)
T ss_dssp -CCCBCSEEEEES
T ss_pred -CCCCCCHHHHHC
T ss_conf -776744105424