HHsearch results for GI: 254780836 and protein with PDBid: 3gnl_A

>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.46  E-value=0.0015  Score=41.15  Aligned_cols=119  Identities=8%  Similarity=0.046  Sum_probs=68.2

Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             03117665404689999999998531005333225504666678899999998980887533456666823475457999
Q gi|254780836|r  207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDL  286 (674)
Q Consensus       207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~  286 (674)
                      .+|.|-+||+|-+-+.+.    ..+      ....++|.|+++.....|+.|+-..|....      -.+..||.+....
T Consensus        23 ~~vlDiGcg~G~l~~~l~----~~~------~~~~V~avDi~~~~l~~A~~n~~~~gl~~~------I~~~~~D~~~~~~   86 (244)
T 3gnl_A           23 ERIADIGSDHAYLPCFAV----KNQ------TASFAIAGEVVDGPFQSAQKQVRSSGLTEQ------IDVRKGNGLAVIE   86 (244)
T ss_dssp             EEEEEETCSTTHHHHHHH----HTT------SEEEEEEEESSHHHHHHHHHHHHHTTCTTT------EEEEECSGGGGCC
T ss_pred             CEEEEECCCHHHHHHHHH----HCC------CCCEEEEEECCHHHHHHHHHHHHHCCCCCC------EEEEECCCHHHHC
T ss_conf             989997186489999999----809------998899963889999999999998299986------7999887504321


Q ss_pred             CCCCEEEE-EEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf             86641899-98168567653100011123442266665357777477065999999999614665788079997389713
Q gi|254780836|r  287 FTGKRFHY-CLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPL  365 (674)
Q Consensus       287 ~~~~kFD~-vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~L  365 (674)
                       ....||. +++..+.                                   -.+..++.........||+..+-.+    
T Consensus        87 -~~~~~d~~viag~g~-----------------------------------~~i~~il~~~~~~l~~~g~liL~p~----  126 (244)
T 3gnl_A           87 -KKDAIDTIVIAGMGG-----------------------------------TLIRTILEEGAAKLAGVTKLILQPN----  126 (244)
T ss_dssp             -GGGCCCEEEEEEECH-----------------------------------HHHHHHHHHTGGGGTTCCEEEEEES----
T ss_pred             -CCCCCCEEEECCCCH-----------------------------------HHHHHHHHHHHHHHCCCCEEEEECC----
T ss_conf             -557876899848888-----------------------------------9999999998997077987999638----


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCE
Q ss_conf             4776443268999999884946
Q gi|254780836|r  366 FNGRAGSGESEIRRWLLENDLI  387 (674)
Q Consensus       366 F~G~agsGEs~IRk~lie~d~i  387 (674)
                            ++...+|+||.+++|.
T Consensus       127 ------~~~~~lR~~L~~~gf~  142 (244)
T 3gnl_A          127 ------IAAWQLREWSEQNNWL  142 (244)
T ss_dssp             ------SCHHHHHHHHHHHTEE
T ss_pred             ------CCHHHHHHHHHHCCCE
T ss_conf             ------7779999999988797