HHsearch results for GI: 254780836 and protein with PDBid: 3gru_A
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assembly S-adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.14 E-value=0.014 Score=34.98 Aligned_cols=103 Identities=15% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCCCCCCCC-CHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 276657536-8179999999973178401101387764031176654046899999999985310053332255046666
Q gi|254780836|r 170 VSEGAEDFM-TPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELE 248 (674)
Q Consensus 170 ~~~~aGeff-TPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin 248 (674)
..+.-||+| +-..|++-+|+.+ .+....+|.+--||+|.+ |.+ +.+ .. ..+++.|++
T Consensus 24 pkK~lGQNFL~d~~i~~kIv~~~----------~~~~~d~VlEIGpG~G~L-T~~---Ll~---~~-----~~v~aiEiD 81 (295)
T 3gru_A 24 PKKKLGQCFLIDKNFVNKAVESA----------NLTKDDVVLEIGLGKGIL-TEE---LAK---NA-----KKVYVIEID 81 (295)
T ss_dssp ------CCEECCHHHHHHHHHHT----------TCCTTCEEEEECCTTSHH-HHH---HHH---HS-----SEEEEEESC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHC----------CCCCCCEEEEECCCHHHH-HHH---HHH---CC-----CCEEEEEEC
T ss_conf 88877823028999999999963----------899999599979974699-999---981---68-----966999988
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 78899999998980887533456666823475457999866418999816856765
Q gi|254780836|r 249 PETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 249 ~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
+......+...--.. .-.|..+|-|.-|. +...++.|++|.||+++
T Consensus 82 ~~l~~~L~~~~~~~~---------n~~ii~~D~l~~d~-~~~~~~~vv~NLPYnIs 127 (295)
T 3gru_A 82 KSLEPYANKLKELYN---------NIEIIWGDALKVDL-NKLDFNKVVANLPYQIS 127 (295)
T ss_dssp GGGHHHHHHHHHHCS---------SEEEEESCTTTSCG-GGSCCSEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCC---------CEEEEECCCCCCCH-HHCCCCEEEEEEHHHHC
T ss_conf 799999997676427---------73688512103771-33375537862026425