HHsearch results for GI: 254780836 and protein with PDBid: 3ldu_A
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.25 E-value=1.7e-11 Score=93.09 Aligned_cols=91 Identities=21% Similarity=0.371 Sum_probs=61.9
Q ss_pred CEEECCCCCCHHHHHHHHHHHHH----------------------------HHHHHCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 40311766540468999999999----------------------------85310053332255046666788999999
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVA----------------------------DCGSHHKIPPILVPHGQELEPETHAVCVA 257 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~----------------------------~~~~~~~~~~~~~lyGQEin~~tyaIak~ 257 (674)
..+++||.||||.+|++|.-... +............+||.|+++....+|+.
T Consensus 196 ~~~l~DPmCGSGTilIEAal~a~~~~pg~~r~f~f~~~~~~~~~~w~~~~~~~~~~~~~~~~~~i~g~D~d~~~i~~a~~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 98557888995679999999980879775622344322126889999999999863204667867996587889999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 98980887533456666823475457999866418999816856765
Q gi|254780836|r 258 GMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 258 nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
|.-.-|+.... .+..+|...-. .....++|++|||||..
T Consensus 276 N~~~agv~~~i------~~~~~d~~~~~--~~~~~~~ivtNPPYG~R 314 (385)
T 3ldu_A 276 NAEIAGVDEYI------EFNVGDATQFK--SEDEFGFIITNPPYGER 314 (385)
T ss_dssp HHHHHTCGGGE------EEEECCGGGCC--CSCBSCEEEECCCCCCS
T ss_pred HHHHCCCCCCE------EEEECCHHHCC--CCCCCCEEEECCCCCCC
T ss_conf 99973997637------88754587759--99999879958970201