HHsearch results for GI: 254780836 and protein with PDBid: 3m33_A
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.91 E-value=0.015 Score=34.68 Aligned_cols=146 Identities=15% Similarity=0.138 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHCC---CCCCCCCCHHHHHHH-HHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 899999999986227---665753681799999-9997317840110138776403117665404689999999998531
Q gi|254780836|r 157 NIYEHLIRRFGSEVS---EGAEDFMTPRDVVHL-ATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGS 232 (674)
Q Consensus 157 ~iyE~LIrkFae~~~---~~aGeffTPR~Vi~L-mv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~ 232 (674)
..|-.+-++|+.... .-...+ .|.....+ ++..| .|| .+|+|-+||||.+.... .+
T Consensus 9 ~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l----------~pg--~rVLDvGCGtG~~a~~L----a~--- 68 (226)
T 3m33_A 9 ESYDRLARELGGYRHPWARVLSGP-DPELTFDLWLSRLL----------TPQ--TRVLEAGCGHGPDAARF----GP--- 68 (226)
T ss_dssp HHHHHHHHHHTTTSCCSCCEESSS-CTTHHHHHHHHHHC----------CTT--CEEEEESCTTSHHHHHH----GG---
T ss_pred HHHHHHHHHHCCCCCHHHHHCCCC-CHHHHHHHHHHHHC----------CCC--CEEEEECCCCCHHHHHH----HC---
T ss_conf 999999987266535366750598-86799999999518----------999--97999884658645777----51---
Q ss_pred HCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEEEEEECCCCCCCCCCCHHH
Q ss_conf 0053332255046666788999999989808875334566668234754579998-664189998168567653100011
Q gi|254780836|r 233 HHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLF-TGKRFHYCLSNPPFGKKWEKDKDA 311 (674)
Q Consensus 233 ~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~-~~~kFD~vlaNPPFg~~Wk~~~~~ 311 (674)
. . ..+.|.|+++..-++|+.+.- + .++..++....-.+ .+..||+|++|+-. .
T Consensus 69 ~-g----~~V~giD~S~~mi~~Ar~~~~--~----------~~~~~~~~~~~lp~~~~~~FD~V~s~~~~--~------- 122 (226)
T 3m33_A 69 Q-A----ARWAAYDFSPELLKLARANAP--H----------ADVYEWNGKGELPAGLGAPFGLIVSRRGP--T------- 122 (226)
T ss_dssp G-S----SEEEEEESCHHHHHHHHHHCT--T----------SEEEECCSCSSCCTTCCCCEEEEEEESCC--S-------
T ss_pred C-C----CEEEECCCCHHHHHHHHHHCC--C----------CCEEEEECCCCCCCCCCCCEEEEEECCCH--H-------
T ss_conf 6-8----689965799999999998589--9----------97899746667988789964699976899--9-------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 123442266665357777477065999999999614665788079997389713477644326899999988494
Q gi|254780836|r 312 VEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDL 386 (674)
Q Consensus 312 v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ 386 (674)
.+++.+...||| ||++.++.+... ...+++.+.+..+
T Consensus 123 -------------------------~~l~ei~rvLkP----GG~l~~~~~~~~---------~~~~~~~l~~~~~ 159 (226)
T 3m33_A 123 -------------------------SVILRLPELAAP----DAHFLYVGPRLN---------VPEVPERLAAVGW 159 (226)
T ss_dssp -------------------------GGGGGHHHHEEE----EEEEEEEESSSC---------CTHHHHHHHHTTC
T ss_pred -------------------------HHHHHHHHHCCC----CCEEEEEECCCC---------CHHHHHHHHHCCC
T ss_conf -------------------------999999998197----818999967877---------1678998754442