HHsearch alignment of GI: 254780837 and MMDB domain: 1yf2_A_1-6_168-211_378-425
>1yf2_A (A:1-6,A:168-211,A:378-425) Type I restriction-modification enzyme, S subunit; structural genomics, PSI, protein structure initiative; 2.40A {Methanocaldococcus jannaschii DSM2661}
Probab=99.59 E-value=1.7e-15 Score=114.55 Aligned_cols=91 Identities=13% Similarity=0.098 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHCHHHHHHHHHHCCCEEEEECHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68868899997098999999862584041002889824721489889999999999999999999999999999999999
Q gi|254780837|r 327 GIDSTYLAWLMRSYDLCKVFYAMGSGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEKIEQSIVLLKER 406 (426)
Q Consensus 327 ~~~~~yl~~~l~s~~~~~~~~~~~~g~~~~i~~~~l~~~~i~lP~leeQ~~I~~~l~~~~~~id~li~~~~~~i~~L~~l 406 (426)
..++.|++|+|++........ .+++++++++.+++.+++|++|+++||++||+.|+. +|..++..++.++.|+++
T Consensus 7 ~~d~~yl~~~l~s~~~~~~~~-~~gs~~~~i~~~~l~~~~i~iP~l~eQ~~I~~~L~~----id~~i~~~~~~~~~l~~l 81 (98)
T 1yf2_A 7 LEEQKQIAKILTKIDEGIEII-EKSINKLERIKKGLMHKLLTKGILEEQKQIAKILSS----VDKSIELKKQKKEKLQRM 81 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEEEECCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 240100520110013554677-777789999999999876641369999999999999----999999999999999999
Q ss_pred HHHHHHHHHCCEEECC
Q ss_conf 9997788622336148
Q gi|254780837|r 407 RSSFIAAAVTGQIDLR 422 (426)
Q Consensus 407 k~sLl~~a~tGki~V~ 422 (426)
+++|++++|+|++||+
T Consensus 82 k~~ll~~~f~g~~r~~ 97 (98)
T 1yf2_A 82 KKKIMELLLTGKVRVK 97 (98)
T ss_dssp HHHHHHHHTTTSCEEC
T ss_pred HHHHHHHHHCCCEEEE
T ss_conf 9999999847305861