HHsearch alignment of GI: 254780837 and MMDB domain: 1yf2_A_212-234_372-377
>1yf2_A (A:212-234,A:372-377) Type I restriction-modification enzyme, S subunit; structural genomics, PSI, protein structure initiative; 2.40A {Methanocaldococcus jannaschii DSM2661}
Probab=91.98 E-value=0.053 Score=30.52 Aligned_cols=22 Identities=45% Similarity=0.981 Sum_probs=16.3
Q ss_pred HHCCCCCCCCCCCCCCCEEEECCCE
Q ss_conf 2325899623706898869884123
Q gi|254780837|r 9 QYKDSGVQWIGAIPKHWKVVPIKRF 33 (426)
Q Consensus 9 ~~k~s~~~w~g~iP~~We~~kL~~i 33 (426)
.||.|+ ||+||++|++-.++.|
T Consensus 4 rfkkse---igeipedwevfeikki 25 (29)
T 1yf2_A 4 RFKKSE---IGEIPEDWEVFEIKKI 25 (29)
T ss_dssp CEECCT---TSSEETTCEEEEHHEE
T ss_pred CCCCCC---CCCCCCCCEEEEHHEE
T ss_conf 333432---4778876558673388