Probab=100.00 E-value=3.2e-33 Score=222.45 Aligned_cols=207 Identities=22% Similarity=0.361 Sum_probs=160.4
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCEEEECCCEEEEE-ECCCCCCC-------CCEEEEEEEEEEECCCEEEECCCCC--CCC
Q ss_conf 7788023258996237068988698841239985-06678887-------7536887000020641233112222--346
Q gi|254780837|r 4 YKAYPQYKDSGVQWIGAIPKHWKVVPIKRFTKLN-TGRTSESG-------KDIIYIGLEDVESGTGKYLPKDGNS--RQS 73 (426)
Q Consensus 4 ~~~~~~~k~s~~~w~g~iP~~We~~kL~~i~~i~-~g~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~--~~~ 73 (426)
|.++.+||+|+ ||+||++|++++|+++|+.. .|.+|+.. .+++++++.++..+.+......... ...
T Consensus 2 ~~~~~~~~~se---lg~iP~~W~~~~L~~i~~~i~~g~~p~~~~~~~~~~~~~p~i~~~~i~~~~~~~~~~~~~~~~~~~ 78 (220)
T d1yf2a1 2 FYKEENFKKTE---IGEIPEDWEIVELKDVCKKIKAGGTPKTSVEEYYKNGTIPFVKIEDITNSNKYLTNTKIKITEEGL 78 (220)
T ss_dssp EECCCCCBCCS---SSSCBSSCCCEEHHHHEEEEEECCCCCTTCGGGTTTCCEEEECHHHHHTSSSEECCCSEEECHHHH
T ss_pred CCCCCCCCCCC---CCCCCCCCEEEEHHHHHEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH
T ss_conf 87767768897---886899888999489544005885899850431268988999812215532114775166514443
Q ss_pred CCCCEEEECCCCEEEEEECCCCCEEEEECCCEEEECCEEEECCCC-CCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHH
Q ss_conf 655337842897899942287523798346489907438714666-7870222221117788988831568716665266
Q gi|254780837|r 74 DTSTVSIFAKGQILYGKLGPYLRKAIIADFDGICSTQFLVLQPKD-VLPELLQGWLLSIDVTQRIEAICEGATMSHADWK 152 (426)
Q Consensus 74 ~~~~~~~~~~gDil~s~~g~~~g~~~i~~~~~~~~~~~~vl~~~~-~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~ 152 (426)
.....+.++.||||++++|+. |.+++.+.+++++.+++++++.+ ..+.|++||+.+. ...+....+.|+++++|+.+
T Consensus 79 ~~~~~~~~~~gdil~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~g~~~~~i~~~ 156 (220)
T d1yf2a1 79 NNSNAWIVPKNSVLFAMYGSI-GETAINKIEVATNQAILGIIPKDNILESEFLYYILAK-NKNYYSKLGMQTTQKNLNAQ 156 (220)
T ss_dssp HTSSCCCBCTTCEEEECSSST-TCEEEESSCBEECSSEEEEEECTTTCCHHHHHHHHHH-THHHHHCCSSSSSCCCCCHH
T ss_pred HHHHEEEECCCCCCCHHHCCC-HHHHHHCCCCEECCCEEEEECCCCCCHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCHH
T ss_conf 210005504433310110100-1222202331021313798326432125666666401-35788875245551214565
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 63445554433234577999999999988877654333222236889999999986078810002357
Q gi|254780837|r 153 GIGNIPMPIPPLAEQVLIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDS 220 (426)
Q Consensus 153 ~l~~~~iplPpl~eQ~kIv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk~L~p~~~~k~s 220 (426)
+|+++.||+||++||++||++|+ .+|++++.+++.++.|+++|+++++++||++|+ ..+++++
T Consensus 157 ~l~~~~i~iPp~~eQ~~I~~~l~----~i~~~i~~~~~~i~~L~~~r~~ll~~l~tg~l~-~~r~~~~ 219 (220)
T d1yf2a1 157 IVKSFKIPLPPLEEQKQIAKILT----KIDEGIEIIEKSINKLERIKKGLMHKLLTKGIG-HSRFKKS 219 (220)
T ss_dssp HHHTCEECCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-CCCEECC
T ss_pred HHHCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCC
T ss_conf 54324652245899999999999----999999999999999999999999998579999-8108999
class: Alpha and beta proteins (a+b)
fold: DNA methylase specificity domain
superfamily: DNA methylase specificity domain
family: Type I restriction modification DNA specificity domain
domain: Bipartite methylase S protein MJ0130
species: Methanocaldococcus jannaschii [TaxId: 2190]