BLAST/PSIBLAST alignment of GI: 254780837 and GI: 113477871 at iteration 1
>gi|113477871|ref|YP_723932.1| restriction modification system DNA specificity subunit [Trichodesmium erythraeum IMS101] Length = 415
>gi|110168919|gb|ABG53459.1| restriction modification system DNA specificity domain [Trichodesmium erythraeum IMS101] Length = 415
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 251/422 (59%), Gaps = 19/422 (4%)
Query: 3 HYKAYPQYKDSGVQWIGAIPKHWKVVPIKRFTKLNTGRTSESGKDIIYIGLEDVESGTGK 62
+++ YP YK SGV+W+G IP+HW++ +K + L G + +G E+ E G
Sbjct: 5 NWQKYPVYKSSGVEWLGEIPEHWEMKRLKFISHLVYGDS---------LGSENREDGNIN 55
Query: 63 YLPKDGN-SRQSDTSTVSIFAKGQILYGKLGPYLRKAIIADFDGIC-STQFLVLQPKDVL 120
+G S +T+S I+ G+ G + K + F C T +L+ Q K
Sbjct: 56 VYGSNGMIGLHSKANTLSPV----IIVGRKGSF-GKIQYSLFPCFCIDTAYLIDQRKT-- 108
Query: 121 PELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPPLAEQVLIREKIIAETVR 180
+ L+ WL ++ I + + + +P+ PL+EQ I + + +
Sbjct: 109 KQNLK-WLCYALQILELDKISQDTGVPGLSREKAYQKLVPVSPLSEQQAIANFLDEKLAQ 167
Query: 181 IDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDSGIEWVGLVPDHWEVKPFFAL 240
ID I ++ R IELLKE+K +++ VTKG+NPDV MK SGIEW+G VP+HWEV P FA+
Sbjct: 168 IDEYIAKKQRIIELLKEQKTVIINQAVTKGINPDVSMKYSGIEWLGEVPEHWEVLPAFAV 227
Query: 241 VTELNRKNTKLIESNILSLSYGNIIQKLETRNMGLKPESYETYQIVDPGEIVFRFIDLQN 300
E N L+E N+LSLSYG II+K T N GL PES+ETYQIV PG I+ R DLQN
Sbjct: 228 FKEQCVINRDLVEKNLLSLSYGKIIRKSFTNNFGLLPESFETYQIVTPGNIILRLTDLQN 287
Query: 301 DKRSLRSAQVMERGIITSAYMAVKPHGIDSTYLAWLMRSYDLCKVFYAMGSGLRQSLKFE 360
DKRSLR V E+GIITSAY+ + P + Y+ L+ YD+ K+FY+MGSG+RQ++KF+
Sbjct: 288 DKRSLRVGLVKEKGIITSAYLCLNPQNVIPEYVYTLLHIYDILKIFYSMGSGVRQNMKFK 347
Query: 361 DVKRLPVLVPPIKEQFDITNVINVETARIDVLVEKIEQSIVLLKERRSSFIAAAVTGQID 420
D+KRLP+ PP+ EQ +I + I + +I+ + IE+ I L++E R++ I+ VTG+ID
Sbjct: 348 DLKRLPITFPPVSEQKEIVSFIEKKLEKIERSLTVIEKEIKLIQEYRTTLISETVTGKID 407
Query: 421 LR 422
+R
Sbjct: 408 VR 409