Query gi|254780838|ref|YP_003065251.1| hypothetical protein CLIBASIA_03665 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 103
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 10:28:01 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780838.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k28d2 b.106.1.1 (D:201-376) 7.8 66 0.0048 12.4 1.1 11 48-58 133-143 (176)
2 d2htja1 a.4.5.73 (A:1-73) P fi 6.6 77 0.0056 12.0 1.1 29 64-94 26-54 (73)
3 d1kv5a_ c.1.1.1 (A:) Triosepho 6.1 23 0.0017 14.9 -1.9 11 41-51 163-173 (249)
4 d2df7a1 b.121.4.9 (A:11-429) B 5.3 91 0.0066 11.6 0.7 13 71-83 389-401 (419)
5 d1zr9a1 g.37.1.4 (A:28-94) Zin 4.5 93 0.0068 11.5 0.3 45 49-94 13-57 (67)
6 d2bh1x1 d.52.10.1 (X:14-81) Ge 4.4 68 0.005 12.3 -0.4 12 55-66 2-13 (68)
7 d2bsya1 b.85.4.1 (A:4-116) Mon 4.2 1.1E+02 0.0082 11.1 2.8 31 33-63 77-110 (113)
8 d2bida_ f.1.4.1 (A:) Proapopto 3.4 1.3E+02 0.0095 10.7 1.2 10 2-11 20-29 (197)
9 d1ibia2 g.39.1.3 (A:145-175) C 3.1 1.2E+02 0.0089 10.9 -0.1 14 25-38 11-24 (31)
10 d1qvba_ c.1.8.4 (A:) beta-Glyc 3.0 1.1E+02 0.008 11.1 -0.4 7 43-49 79-85 (481)
No 1
>d1k28d2 b.106.1.1 (D:201-376) Baseplate structural protein gp27 {Bacteriophage T4 [TaxId: 10665]}
Probab=7.79 E-value=66 Score=12.37 Aligned_cols=11 Identities=45% Similarity=0.658 Sum_probs=6.0
Q ss_pred CCCEEEEEEEE
Q ss_conf 35417998740
Q gi|254780838|r 48 SRGEFYVDLLP 58 (103)
Q Consensus 48 srgefyvdllp 58 (103)
-|+|||||-.-
T Consensus 133 f~~ef~VDEVI 143 (176)
T d1k28d2 133 FKTEFYVDEVI 143 (176)
T ss_dssp CCSCEEEEEEE
T ss_pred HCCCHHHHHHH
T ss_conf 32410177888
No 2
>d2htja1 a.4.5.73 (A:1-73) P fimbrial regulatory protein PapI {Escherichia coli [TaxId: 562]}
Probab=6.63 E-value=77 Score=11.99 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf 1236777677744654212201371334102
Q gi|254780838|r 64 RSSYQQRSNILSHRKEIAIDQRRTPITQKLS 94 (103)
Q Consensus 64 rssyqqrsnilshrkeiaidqrrtpitqkls 94 (103)
-|.||.|--.+.-.||-.| +|+|..+-.+
T Consensus 26 vsaYQARyYL~~Lekegki--~RsPlRrGa~ 54 (73)
T d2htja1 26 VTDYQARYYLLLLEKAGMV--QRSPLRRGMA 54 (73)
T ss_dssp SCHHHHHHHHHHHHHHTSE--EEECCSSSSS
T ss_pred HHHHHHHHHHHHHHHHCCC--CCCHHHHHHH
T ss_conf 3899999999998771570--1484540058
No 3
>d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]}
Probab=6.14 E-value=23 Score=14.87 Aligned_cols=11 Identities=27% Similarity=0.821 Sum_probs=5.4
Q ss_pred EEEEEEECCCE
Q ss_conf 99987603541
Q gi|254780838|r 41 MVFEISWSRGE 51 (103)
Q Consensus 41 mvfeiswsrge 51 (103)
..+|-.|+-|.
T Consensus 163 IAYEPvWAIGt 173 (249)
T d1kv5a_ 163 IAYEPVWAIGT 173 (249)
T ss_dssp EEECCGGGSSS
T ss_pred EECCCEECCCC
T ss_conf 85175211365
No 4
>d2df7a1 b.121.4.9 (A:11-429) Birnavirus VP2 {Infectious bursal disease virus [TaxId: 10995]}
Probab=5.30 E-value=91 Score=11.58 Aligned_cols=13 Identities=38% Similarity=0.560 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 6777446542122
Q gi|254780838|r 71 SNILSHRKEIAID 83 (103)
Q Consensus 71 snilshrkeiaid 83 (103)
.-|||||.|..|.
T Consensus 389 K~iLs~Re~L~ir 401 (419)
T d2df7a1 389 KLILSERERLGIK 401 (419)
T ss_dssp HHHHHTHHHHTCC
T ss_pred HHHHCCHHHCCCE
T ss_conf 7774343114863
No 5
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.51 E-value=93 Score=11.53 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=32.8
Q ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
Q ss_conf 5417998740240001236777677744654212201371334102
Q gi|254780838|r 49 RGEFYVDLLPFNFASRSSYQQRSNILSHRKEIAIDQRRTPITQKLS 94 (103)
Q Consensus 49 rgefyvdllpfnfasrssyqqrsnilshrkeiaidqrrtpitqkls 94 (103)
-|.||--.---.|.+...++..-+--.|++.+.-- +..|.||+-+
T Consensus 13 ~gqfYCv~C~K~F~se~~l~~H~ksKkHKrrvk~L-~~~p~t~~ea 57 (67)
T d1zr9a1 13 GGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL-SVEPYSQEEA 57 (67)
T ss_dssp GGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHH-TSCSSCTTTS
T ss_pred CCEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCHHHH
T ss_conf 98786130218369899999997100899999996-1276888999
No 6
>d2bh1x1 d.52.10.1 (X:14-81) General secretion pathway protein E, EpsE {Vibrio cholerae [TaxId: 666]}
Probab=4.40 E-value=68 Score=12.28 Aligned_cols=12 Identities=50% Similarity=0.813 Sum_probs=7.6
Q ss_pred EEEECCCCHHHH
Q ss_conf 874024000123
Q gi|254780838|r 55 DLLPFNFASRSS 66 (103)
Q Consensus 55 dllpfnfasrss 66 (103)
+-|||.||.+..
T Consensus 2 ~rLPfsFAr~~g 13 (68)
T d2bh1x1 2 RRLPFSFANRFK 13 (68)
T ss_dssp CSCCHHHHHHHT
T ss_pred CCCCHHHHHHCC
T ss_conf 878778875178
No 7
>d2bsya1 b.85.4.1 (A:4-116) Monomeric viral dUTPase {Epstein-barr virus [TaxId: 10376]}
Probab=4.16 E-value=1.1e+02 Score=11.07 Aligned_cols=31 Identities=23% Similarity=0.449 Sum_probs=20.3
Q ss_pred CCEEEEEEEE---EEEEECCCEEEEEEEECCCCH
Q ss_conf 6618899999---987603541799874024000
Q gi|254780838|r 33 DGELFIRIMV---FEISWSRGEFYVDLLPFNFAS 63 (103)
Q Consensus 33 dgelfirimv---feiswsrgefyvdllpfnfas 63 (103)
.||+++.+.- -.+.+.+|+.-+.|++|++++
T Consensus 77 ~Gei~v~l~N~~~~~~~i~~G~~~~qlv~~~~~t 110 (113)
T d2bsya1 77 TGELRLILQNQRRYNSTLRPSELKIHLAAFRYAT 110 (113)
T ss_dssp CSCEEEEEEESSSSCEEECTTSCEEEEEEEEEEC
T ss_pred EEEEEEEEEECCCCCEEECCCCEEEEEEEEECCC
T ss_conf 0049999996899609986899999999997236
No 8
>d2bida_ f.1.4.1 (A:) Proapoptotic molecule Bid {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.43 E-value=1.3e+02 Score=10.69 Aligned_cols=10 Identities=60% Similarity=0.969 Sum_probs=6.7
Q ss_pred CHHHHHHHHH
Q ss_conf 0579999999
Q gi|254780838|r 2 NSLLFGFLAF 11 (103)
Q Consensus 2 nsllfgflaf 11 (103)
|-|+||||.-
T Consensus 20 ~lL~F~FLq~ 29 (197)
T d2bida_ 20 NLLVFGFLQS 29 (197)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999985
No 9
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=3.10 E-value=1.2e+02 Score=10.87 Aligned_cols=14 Identities=29% Similarity=0.601 Sum_probs=8.3
Q ss_pred HHHHHCCCCCEEEE
Q ss_conf 87620013661889
Q gi|254780838|r 25 ESFFVEKEDGELFI 38 (103)
Q Consensus 25 esffvekedgelfi 38 (103)
||--|...|||+|-
T Consensus 11 estt~adkdgeiyc 24 (31)
T d1ibia2 11 ESTTLTEKEGEIYC 24 (31)
T ss_dssp CSSCSEEETTEEEC
T ss_pred CCCEEECCCCCEEE
T ss_conf 42065536873897
No 10
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]}
Probab=3.04 E-value=1.1e+02 Score=11.12 Aligned_cols=7 Identities=43% Similarity=1.127 Sum_probs=0.0
Q ss_pred EEEEECC
Q ss_conf 9876035
Q gi|254780838|r 43 FEISWSR 49 (103)
Q Consensus 43 feiswsr 49 (103)
|-|||||
T Consensus 79 fSi~WsR 85 (481)
T d1qvba_ 79 VGVEWSR 85 (481)
T ss_dssp EECCHHH
T ss_pred CCCCHHH
T ss_conf 2375876
Done!