HHsearch alignment for GI: 254780841 and conserved domain: COG0558

Probab=99.49  E-value=3.4e-12  Score=88.29  Aligned_cols=86  Identities=20%  Similarity=0.129  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999999999999-99999999999849--88999999999999831238999982874367532636675579999999
Q gi|254780841|r   15 VSAFSVHILTAFG-SFIAFLGVTAAAQY--RIVDMFWWLGLALIIDGFDGPIARKMRVKEVLPNWSGDTLDNIIDYLTYV   91 (246)
Q Consensus        15 ~~~~~p~l~T~~~-l~~G~~ai~~a~~g--~~~~A~~~i~iA~i~D~lDG~iAR~~~~~s~fp~~~G~~LDSLaD~vsFG   91 (246)
T Consensus        10 ~~~~~PN~lTl~r~~l~~~~~~~~~~~~~~~~~~~~~l~~~a~l~D~lDG~lAR~~~~~S~~----G~~LDp~~Dk~~~~   85 (192)
T COG0558          10 KLGNTPNQLTLLRIFLIPLFALLLLLPGLGLLLLALVLFLLAALTDALDGYLARKWGQVSRF----GAFLDPVADKLLDA   85 (192)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCH----HHHHHHHHHHHHHH
T ss_conf             73169719999999999999999999856799999999999999986009999981898841----65743255799999


Q ss_pred             HHHHHHHHHHHCC
Q ss_conf             9999999997203
Q gi|254780841|r   92 VLPAFALYQSNLL  104 (246)
Q Consensus        92 vaPa~l~y~~~~~  104 (246)
T Consensus        86 ~~l~~l~~~~~~~   98 (192)
T COG0558          86 ALLLGLVALGPVS   98 (192)
T ss_pred             HHHHHHHHHHCCC
T ss_conf             9999999980201